RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 NPHS1O60500 1241 aa22.08■■□□□ 1.12
IRF3-228ENST00000601291 PSIP1O75475 530 aaKnown RBP22.08■■□□□ 1.12
IRF3-228ENST00000601291 FAM107AO95990 144 aa22.08■■□□□ 1.12
IRF3-228ENST00000601291 TDGF1P13385 188 aa22.08■■□□□ 1.12
IRF3-228ENST00000601291 RPIAP49247 311 aa22.08■■□□□ 1.12
IRF3-228ENST00000601291 SRP54P61011 504 aaKnown RBP22.08■■□□□ 1.12
IRF3-228ENST00000601291 NAA20P61599 178 aa22.08■■□□□ 1.12
IRF3-228ENST00000601291 RACK1P63244 317 aaKnown RBP22.08■■□□□ 1.12
IRF3-228ENST00000601291 CDKL1Q00532 357 aa22.08■■□□□ 1.12
IRF3-228ENST00000601291 CSTF1Q05048 431 aaKnown RBP22.08■■□□□ 1.12
IRF3-228ENST00000601291 CDKL4Q5MAI5 379 aa22.08■■□□□ 1.12
IRF3-228ENST00000601291 XKR5Q6UX68 686 aa22.08■■□□□ 1.12
IRF3-228ENST00000601291 PDZD3Q86UT5 571 aa22.08■■□□□ 1.12
IRF3-228ENST00000601291 C11orf74Q86VG3 221 aa22.08■■□□□ 1.12
IRF3-228ENST00000601291 DCP2Q8IU60 420 aaKnown RBP22.08■■□□□ 1.12
IRF3-228ENST00000601291 CFAP61Q8NHU2 1237 aa22.08■■□□□ 1.12
IRF3-228ENST00000601291 DLG3Q92796 817 aa22.08■■□□□ 1.12
IRF3-228ENST00000601291 DUSP15Q9H1R2 295 aaPredicted RBP22.08■■□□□ 1.12
IRF3-228ENST00000601291 OR52A5Q9H2C5 316 aa22.08■■□□□ 1.12
IRF3-228ENST00000601291 OSGEPL1Q9H4B0 414 aa22.08■■□□□ 1.12
IRF3-228ENST00000601291 RABEP2Q9H5N1 569 aa22.08■■□□□ 1.12
IRF3-228ENST00000601291 GPR27Q9NS67 375 aa22.08■■□□□ 1.12
IRF3-228ENST00000601291 PDE10AQ9Y233 779 aa22.08■■□□□ 1.12
IRF3-228ENST00000601291 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 HSPA4LO95757 839 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 GUCA1CO95843 209 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 ANXA5P08758 320 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 SLC35G4P0C7Q5 338 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 DRD4P21917 467 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 AP1S2P56377 157 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 OCRLQ01968 901 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 LRP8Q14114 963 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 RCN2Q14257 317 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 SETDB1Q15047 1291 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 TERF2Q15554 542 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 WDR45BQ5MNZ6 344 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 ZNF678Q5SXM1 525 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 CES4AQ5XG92 561 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 RD3Q7Z3Z2 195 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 TMEFF1Q8IYR6 380 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 SLC22A18ASQ8N1D0 253 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 TMEM105Q8N8V8 129 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 MFSD2AQ8NA29 543 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 CNDP1Q96KN2 507 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 CCT8L2Q96SF2 557 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 DRC3Q9H069 523 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 MIR1-1HGQ9H1L0 117 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 ARL15Q9NXU5 204 aa22.07■■□□□ 1.12
IRF3-228ENST00000601291 SPTY2D1-AS1A0A0U1RR47 76 aa22.06■■□□□ 1.12
IRF3-228ENST00000601291 IFRD1O00458 451 aaPredicted RBP22.06■■□□□ 1.12
IRF3-228ENST00000601291 SNUPNO95149 360 aaKnown RBP22.06■■□□□ 1.12
IRF3-228ENST00000601291 IDSP22304 550 aa22.06■■□□□ 1.12
IRF3-228ENST00000601291 CD38P28907 300 aa22.06■■□□□ 1.12
IRF3-228ENST00000601291 OVGP1Q12889 678 aa22.06■■□□□ 1.12
IRF3-228ENST00000601291 SULT1C3Q6IMI6 304 aa22.06■■□□□ 1.12
IRF3-228ENST00000601291 UNC5DQ6UXZ4 953 aa22.06■■□□□ 1.12
IRF3-228ENST00000601291 LPCAT2Q7L5N7 544 aa22.06■■□□□ 1.12
IRF3-228ENST00000601291 IQCHQ86VS3 1027 aa22.06■■□□□ 1.12
IRF3-228ENST00000601291 CRLF3Q8IUI8 442 aa22.06■■□□□ 1.12
IRF3-228ENST00000601291 RASGRP3Q8IV61 690 aa22.06■■□□□ 1.12
IRF3-228ENST00000601291 BCAS4Q8TDM0 211 aa22.06■■□□□ 1.12
IRF3-228ENST00000601291 TSACCQ96A04 125 aaPredicted RBP22.06■■□□□ 1.12
IRF3-228ENST00000601291 GRAMD1AQ96CP6 724 aa22.06■■□□□ 1.12
IRF3-228ENST00000601291 KCNK6Q9Y257 313 aa22.06■■□□□ 1.12
IRF3-228ENST00000601291 TNPO3Q9Y5L0 923 aaKnown RBP22.06■■□□□ 1.12
IRF3-228ENST00000601291 TECTAO75443 2155 aa22.06■■□□□ 1.12
IRF3-228ENST00000601291 SUPT7LO94864 414 aa22.05■■□□□ 1.12
IRF3-228ENST00000601291 EEF1DP29692 281 aaKnown RBP22.05■■□□□ 1.12
IRF3-228ENST00000601291 ALG11Q2TAA5 492 aa22.05■■□□□ 1.12
IRF3-228ENST00000601291 HID1Q8IV36 788 aa22.05■■□□□ 1.12
IRF3-228ENST00000601291 RGL4Q8IZJ4 473 aa22.05■■□□□ 1.12
IRF3-228ENST00000601291 TCAIMQ8N3R3 496 aa22.05■■□□□ 1.12
IRF3-228ENST00000601291 DTWD2Q8NBA8 298 aa22.05■■□□□ 1.12
IRF3-228ENST00000601291 TRMOQ9BU70 441 aa22.05■■□□□ 1.12
IRF3-228ENST00000601291 WWOXQ9NZC7 414 aa22.05■■□□□ 1.12
IRF3-228ENST00000601291 DGKBQ9Y6T7 804 aa22.05■■□□□ 1.12
IRF3-228ENST00000601291 ARHGEF33A8MVX0 844 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 NDUFAB1O14561 156 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 ITM2AO43736 263 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 LYPLA1O75608 230 aaPredicted RBP22.04■■□□□ 1.12
IRF3-228ENST00000601291 RASGRP1O95267 797 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 SIX3O95343 332 aaPredicted RBP22.04■■□□□ 1.12
IRF3-228ENST00000601291 TNFP01375 233 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 RPN2P04844 631 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 MAOBP27338 520 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 ACADLP28330 430 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 ANKS6Q68DC2 871 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 FRMD7Q6ZUT3 714 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 PARGQ86W56 976 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 FBXO15Q8NCQ5 510 aaPredicted RBP22.04■■□□□ 1.12
IRF3-228ENST00000601291 MAGEC3Q8TD91 643 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 C1QTNF3Q9BXJ4 246 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 EML4Q9HC35 981 aaKnown RBP22.04■■□□□ 1.12
IRF3-228ENST00000601291 TRNAU1APQ9NX07 287 aaKnown RBP22.04■■□□□ 1.12
IRF3-228ENST00000601291 FBXO4Q9UKT5 387 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 PSMD13Q9UNM6 376 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 SLCO1B1Q9Y6L6 691 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 TROVE2P10155 538 aaKnown RBP eCLIP22.04■■□□□ 1.121e-6■□□□□ 8.4
IRF3-228ENST00000601291 BDKRB1P46663 353 aa22.04■■□□□ 1.12
IRF3-228ENST00000601291 HNMTP50135 292 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms