RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 SBK3P0C264 359 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 GRK2P25098 689 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 CLCNKAP51800 687 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 AFF3P51826 1226 aaKnown RBP15.11■□□□□ 0.01
UPF1-206ENST00000598471 NUBP1P53384 320 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 C21orf59P57076 290 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 DNAJB13P59910 316 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 ILF3Q12906 894 aaKnown RBP eCLIP15.11■□□□□ 0.01
UPF1-206ENST00000598471 ABRQ12979 859 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 ANGPT1Q15389 498 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 TGFBIQ15582 683 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 CHI3L2Q15782 390 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 CDKL4Q5MAI5 379 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 TTC23LQ6PF05 361 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 SBSNQ6UWP8 590 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 UNC5DQ6UXZ4 953 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 FAM83HQ6ZRV2 1179 aaPredicted RBP15.11■□□□□ 0.01
UPF1-206ENST00000598471 RGS9BPQ6ZS82 235 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 FBXO39Q8N4B4 442 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 LILRA3Q8N6C8 439 aaPredicted RBP15.11■□□□□ 0.01
UPF1-206ENST00000598471 CFAP61Q8NHU2 1237 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 ZNF75CPQ92670 426 aaPredicted RBP15.11■□□□□ 0.01
UPF1-206ENST00000598471 EGFL8Q99944 293 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 SLC12A9Q9BXP2 914 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 MANSC1Q9H8J5 431 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 PARVBQ9HBI1 364 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 TM7SF3Q9NS93 570 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 KCNK6Q9Y257 313 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 PDZK1P1A8MUH7 402 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 GFYI3L273 518 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 KLF11O14901 512 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 FFAR2O15552 330 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 PSIP1O75475 530 aaKnown RBP15.1■□□□□ 0.01
UPF1-206ENST00000598471 ANXA5P08758 320 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 BGNP21810 368 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 PDHA2P29803 388 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 LSP1P33241 339 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 HALP42357 657 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 DPP6P42658 865 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 HK3P52790 923 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 AP1S2P56377 157 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 NAA20P61599 178 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 CDKL1Q00532 357 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 FZD2Q14332 565 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 PPP1R3AQ16821 1122 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 PLK5Q496M5 336 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 CFAP157Q5JU67 520 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 TCAIMQ8N3R3 496 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 PTGR2Q8N8N7 351 aaPredicted RBP15.1■□□□□ 0.01
UPF1-206ENST00000598471 C1orf216Q8TAB5 229 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 MAGEC3Q8TD91 643 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 NELL1Q92832 810 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 GSDMCQ9BYG8 508 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 OR52A5Q9H2C5 316 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 UTP6Q9NYH9 597 aaKnown RBP15.1■□□□□ 0.01
UPF1-206ENST00000598471 NCKIPSDQ9NZQ3 722 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 ADAMTS6Q9UKP5 1117 aa15.1■□□□□ 0.01
UPF1-206ENST00000598471 CACNA1IQ9P0X4 2223 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 EML5Q05BV3 1969 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 A0A1B0GTW7 788 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 NEMP2A6NFY4 417 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 NCF1BA6NI72 391 aaPredicted RBP15.09■□□□□ 0.01
UPF1-206ENST00000598471 SRRM3A6NNA2 597 aaPredicted RBP15.09■□□□□ 0.01
UPF1-206ENST00000598471 NCF1CA8MVU1 366 aaPredicted RBP15.09■□□□□ 0.01
UPF1-206ENST00000598471 TMEM114B3SHH9 223 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 STX16-NPEPL1H3BU86 382 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 STX16O14662 325 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 VILLO15195 856 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 KLK8O60259 260 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 SHOX2O60902 331 aaPredicted RBP15.09■□□□□ 0.01
UPF1-206ENST00000598471 WNT1P04628 370 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 VIMP08670 466 aaKnown RBP15.09■□□□□ 0.01
UPF1-206ENST00000598471 FGF3P11487 239 aaPredicted RBP15.09■□□□□ 0.01
UPF1-206ENST00000598471 CTSEP14091 401 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 NCF1P14598 390 aaPredicted RBP15.09■□□□□ 0.01
UPF1-206ENST00000598471 SERPINB5P36952 375 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 ACTR1BP42025 376 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 KCNC1P48547 511 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 RPIAP49247 311 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 ALDH18A1P54886 795 aaKnown RBP15.09■□□□□ 0.01
UPF1-206ENST00000598471 NXPH1P58417 271 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 ACTR1AP61163 376 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 CBX1P83916 185 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 CTBSQ01459 385 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 EIF2B5Q13144 721 aaKnown RBP15.09■□□□□ 0.01
UPF1-206ENST00000598471 SRSF5Q13243 272 aaKnown RBP15.09■□□□□ 0.01
UPF1-206ENST00000598471 STX3Q13277 289 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 PFKFB4Q16877 469 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 SULT1C3Q6IMI6 304 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 RASGRP3Q8IV61 690 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 PHACTR4Q8IZ21 702 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 PDPRQ8NCN5 879 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 FBXO15Q8NCQ5 510 aaPredicted RBP15.09■□□□□ 0.01
UPF1-206ENST00000598471 PHF21BQ96EK2 531 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 NSRP1Q9H0G5 558 aaKnown RBP15.09■□□□□ 0.01
UPF1-206ENST00000598471 WWP1Q9H0M0 922 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 DNAJC28Q9NX36 388 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 ARL15Q9NXU5 204 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 PDE10AQ9Y233 779 aa15.09■□□□□ 0.01
UPF1-206ENST00000598471 ASF1AQ9Y294 204 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms