RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CRTC2Q53ET0 693 aaPredicted RBP10.23□□□□□ -0.77
CCDC9-203ENST00000596938 FASTKD1Q53R41 847 aaKnown RBP10.23□□□□□ -0.77
CCDC9-203ENST00000596938 AARS2Q5JTZ9 985 aaKnown RBP10.23□□□□□ -0.77
CCDC9-203ENST00000596938 ARMC3Q5W041 872 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 LRRC8BQ6P9F7 803 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 RASGRP3Q8IV61 690 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 EXD3Q8N9H8 876 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 OR8K5Q8NH50 307 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 EXTL1Q92935 676 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 CATSPER2Q96P56 530 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 KIFC1Q9BW19 673 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 CARD6Q9BX69 1037 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 GPN2Q9H9Y4 310 aaPredicted RBP10.23□□□□□ -0.77
CCDC9-203ENST00000596938 GRPEL1Q9HAV7 217 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 TREX1Q9NSU2 369 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 BFARQ9NZS9 450 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 ANAPC5Q9UJX4 755 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 POMT2Q9UKY4 750 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 RARRES3Q9UL19 164 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 BOD1L1Q8NFC6 3051 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.22□□□□□ -0.77
CCDC9-203ENST00000596938 ZNF891A8MT65 544 aaPredicted RBP10.22□□□□□ -0.77
CCDC9-203ENST00000596938 CD3EAPO15446 510 aaKnown RBP10.22□□□□□ -0.77
CCDC9-203ENST00000596938 MT-ND3P03897 115 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 CCNYL3P0C7X3 344 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 MSL3P1P0C860 447 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 POLR2CP19387 275 aaPredicted RBP10.22□□□□□ -0.77
CCDC9-203ENST00000596938 TPSB2P20231 275 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 PRDX3P30048 256 aaKnown RBP10.22□□□□□ -0.77
CCDC9-203ENST00000596938 MAGEA6P43360 314 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 PREPP48147 710 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 TTPAP49638 278 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 KPNA2P52292 529 aaKnown RBP10.22□□□□□ -0.77
CCDC9-203ENST00000596938 SESN2P58004 480 aaPredicted RBP10.22□□□□□ -0.77
CCDC9-203ENST00000596938 TUBB4BP68371 445 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 BASP1P80723 227 aaKnown RBP10.22□□□□□ -0.77
CCDC9-203ENST00000596938 MC1RQ01726 317 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 TUBB3Q13509 450 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 TUBB2AQ13885 445 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 KCNAB1Q14722 419 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 TPSAB1Q15661 275 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 TMTC4Q5T4D3 741 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 AMIGO1Q86WK6 493 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 REXO1L1PQ8IX06 675 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 TBC1D21Q8IYX1 336 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 UNC5BQ8IZJ1 945 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 OR52E1Q8NGJ3 308 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 ELMO1Q92556 727 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 ELMO2Q96JJ3 720 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 NAP1L3Q99457 506 aaPredicted RBP10.22□□□□□ -0.77
CCDC9-203ENST00000596938 ARHGAP9Q9BRR9 750 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 TUBB2BQ9BVA1 445 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 SEMA4CQ9C0C4 833 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 MRM3Q9HC36 420 aaKnown RBP10.22□□□□□ -0.77
CCDC9-203ENST00000596938 SYTL2Q9HCH5 934 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 FGF21Q9NSA1 209 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 KCND1Q9NSA2 647 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 IL17BQ9UHF5 180 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 POLG2Q9UHN1 485 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 PADI1Q9ULC6 663 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 BTRCQ9Y297 605 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 RPS6KL1Q9Y6S9 549 aa10.22□□□□□ -0.77
CCDC9-203ENST00000596938 MAGEB16A2A368 324 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 C2orf74A8MZ97 194 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 BTN3A3O00478 584 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 PRMT5O14744 637 aaPredicted RBP10.21□□□□□ -0.77
CCDC9-203ENST00000596938 TERTO14746 1132 aaKnown RBP10.21□□□□□ -0.77
CCDC9-203ENST00000596938 NKX2-8O15522 239 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 ZSCAN12O43309 604 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 GPC4O75487 556 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 KIAA0754O94854 1291 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 RECKO95980 971 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 EBLN1P0CF75 366 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 CCR7P32248 378 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 CRADDP78560 199 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 SARNPP82979 210 aaKnown RBP10.21□□□□□ -0.77
CCDC9-203ENST00000596938 PRKG2Q13237 762 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 SEMA3AQ14563 771 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 CYP1B1Q16678 543 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 PWWP2BQ6NUJ5 590 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 BORAQ6PGQ7 559 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 ZNF605Q86T29 641 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 LRRC6Q86X45 466 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 ADGRF3Q8IZF5 1079 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 MPP5Q8N3R9 675 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 GALNT6Q8NCL4 622 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 OR5K2Q8NHB8 316 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 ASZ1Q8WWH4 475 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 MAGOHBQ96A72 148 aaKnown RBP10.21□□□□□ -0.77
CCDC9-203ENST00000596938 ZNF501Q96CX3 271 aaPredicted RBP10.21□□□□□ -0.77
CCDC9-203ENST00000596938 STAMBPL1Q96FJ0 436 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 MS4A14Q96JA4 679 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 TSSK1BQ9BXA7 367 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 PITPNM3Q9BZ71 974 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 FAM117AQ9C073 453 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 TWSG1Q9GZX9 223 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 LATS2Q9NRM7 1088 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 CATSPERZQ9NTU4 200 aa10.21□□□□□ -0.77
CCDC9-203ENST00000596938 GEMIN8Q9NWZ8 242 aaKnown RBP10.21□□□□□ -0.77
CCDC9-203ENST00000596938 ASF1AQ9Y294 204 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms