RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 RHBDF1Q96CC6 855 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 RMDN1Q96DB5 314 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 REXO5Q96IC2 774 aaKnown RBP13.02□□□□□ -0.33
VRK3-209ENST00000594948 CINPQ9BW66 212 aaPredicted RBP13.02□□□□□ -0.33
VRK3-209ENST00000594948 P2RY12Q9H244 342 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 ANKHQ9HCJ1 492 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 TLR8Q9NR97 1041 aaKnown RBP13.02□□□□□ -0.33
VRK3-209ENST00000594948 MTRRQ9UBK8 725 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 DHRS7Q9Y394 339 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 PCDHB5Q9Y5E4 795 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 PCDHB1Q9Y5F3 818 aa13.02□□□□□ -0.33
VRK3-209ENST00000594948 CNOT3O75175 753 aaKnown RBP13.01□□□□□ -0.33
VRK3-209ENST00000594948 ARHGEF15O94989 841 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 GLUD1P00367 558 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 OR4Q2P0C623 313 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 MC4RP32245 332 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 HPCAL1P37235 193 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 CLCN7P51798 805 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 CACNB2Q08289 660 aaPredicted RBP13.01□□□□□ -0.33
VRK3-209ENST00000594948 TRAF3Q13114 568 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 CDK5R2Q13319 367 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 KEAP1Q14145 624 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 PON2Q15165 354 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 MAPKAPK3Q16644 382 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 DGUOKQ16854 277 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 RFTN2Q52LD8 501 aaPredicted RBP13.01□□□□□ -0.33
VRK3-209ENST00000594948 AGAP7PQ5VUJ5 663 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 GDF6Q6KF10 455 aaPredicted RBP13.01□□□□□ -0.33
VRK3-209ENST00000594948 PSAPL1Q6NUJ1 521 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 SPESP1Q6UW49 350 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 CIR1Q86X95 450 aaPredicted RBP13.01□□□□□ -0.33
VRK3-209ENST00000594948 ARL10Q8N8L6 244 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 PHF10Q8WUB8 498 aaKnown RBP13.01□□□□□ -0.33
VRK3-209ENST00000594948 SGCDQ92629 289 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 YIPF6Q96EC8 236 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 UBA2Q9UBT2 640 aaPredicted RBP13.01□□□□□ -0.33
VRK3-209ENST00000594948 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.01□□□□□ -0.33
VRK3-209ENST00000594948 PADI3Q9ULW8 664 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 TPRKBQ9Y3C4 175 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 VWA8A3KMH1 1905 aa13.01□□□□□ -0.33
VRK3-209ENST00000594948 SLC12A8A0AV02 714 aa13□□□□□ -0.33
VRK3-209ENST00000594948 E5RI56 91 aa13□□□□□ -0.33
VRK3-209ENST00000594948 F5H5T6 163 aa13□□□□□ -0.33
VRK3-209ENST00000594948 RAD51BO15315 384 aa13□□□□□ -0.33
VRK3-209ENST00000594948 KDELR3O43731 214 aa13□□□□□ -0.33
VRK3-209ENST00000594948 HS6ST1O60243 411 aa13□□□□□ -0.33
VRK3-209ENST00000594948 NOBOXO60393 691 aa13□□□□□ -0.33
VRK3-209ENST00000594948 ERN1O75460 977 aaKnown RBP13□□□□□ -0.33
VRK3-209ENST00000594948 JRKO75564 520 aa13□□□□□ -0.33
VRK3-209ENST00000594948 PRKD3O94806 890 aa13□□□□□ -0.33
VRK3-209ENST00000594948 PRLP01236 227 aa13□□□□□ -0.33
VRK3-209ENST00000594948 CTSHP09668 335 aa13□□□□□ -0.33
VRK3-209ENST00000594948 MVKQ03426 396 aa13□□□□□ -0.33
VRK3-209ENST00000594948 DDR2Q16832 855 aa13□□□□□ -0.33
VRK3-209ENST00000594948 NADSYN1Q6IA69 706 aa13□□□□□ -0.33
VRK3-209ENST00000594948 PRSS48Q7RTY5 328 aa13□□□□□ -0.33
VRK3-209ENST00000594948 SLCO6A1Q86UG4 719 aa13□□□□□ -0.33
VRK3-209ENST00000594948 PIANPQ8IYJ0 282 aa13□□□□□ -0.33
VRK3-209ENST00000594948 OR7A2PQ8NGA2 310 aa13□□□□□ -0.33
VRK3-209ENST00000594948 OR10A6Q8NH74 314 aa13□□□□□ -0.33
VRK3-209ENST00000594948 FBXO32Q969P5 355 aa13□□□□□ -0.33
VRK3-209ENST00000594948 ESAMQ96AP7 390 aa13□□□□□ -0.33
VRK3-209ENST00000594948 ABHD8Q96I13 439 aa13□□□□□ -0.33
VRK3-209ENST00000594948 CDK15Q96Q40 435 aa13□□□□□ -0.33
VRK3-209ENST00000594948 THUMPD3Q9BV44 507 aaKnown RBP13□□□□□ -0.33
VRK3-209ENST00000594948 DGCR6LQ9BY27 220 aa13□□□□□ -0.33
VRK3-209ENST00000594948 DPY30Q9C005 99 aa13□□□□□ -0.33
VRK3-209ENST00000594948 DUSP21Q9H596 190 aa13□□□□□ -0.33
VRK3-209ENST00000594948 CLMPQ9H6B4 373 aa13□□□□□ -0.33
VRK3-209ENST00000594948 PAK1IP1Q9NWT1 392 aaPredicted RBP13□□□□□ -0.33
VRK3-209ENST00000594948 RNF181Q9P0P0 153 aa13□□□□□ -0.33
VRK3-209ENST00000594948 TMEFF2Q9UIK5 374 aaPredicted RBP13□□□□□ -0.33
VRK3-209ENST00000594948 FKBPLQ9UIM3 349 aa13□□□□□ -0.33
VRK3-209ENST00000594948 MAN2B2Q9Y2E5 1009 aa13□□□□□ -0.33
VRK3-209ENST00000594948 TTC36A6NLP5 189 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 BCKDKO14874 412 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 CREG1O75629 220 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 INMTO95050 263 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 IGHA2P01877 340 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 SLC2A4P14672 509 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 AGXTP21549 392 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 CD52P31358 61 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 MAGEA2P43356 314 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 GPR15P49685 360 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 CDKN1CP49918 316 aaPredicted RBP12.99□□□□□ -0.33
VRK3-209ENST00000594948 GZMMP51124 257 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 IST1P53990 364 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 HUNKP57058 714 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 EMX1Q04741 257 aaPredicted RBP12.99□□□□□ -0.33
VRK3-209ENST00000594948 ABRAXAS2Q15018 415 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 C10orf120Q5SQS8 335 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 LRIF1Q5T3J3 769 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 SYT6Q5T7P8 510 aaPredicted RBP12.99□□□□□ -0.33
VRK3-209ENST00000594948 SHQ1Q6PI26 577 aaKnown RBP12.99□□□□□ -0.33
VRK3-209ENST00000594948 SBSNQ6UWP8 590 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 TRIM46Q7Z4K8 759 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 MILR1Q7Z6M3 343 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 ZNF598Q86UK7 904 aaKnown RBP12.99□□□□□ -0.33
VRK3-209ENST00000594948 MSRB3Q8IXL7 192 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 SVOPQ8N4V2 548 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 214.5 ms