RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 FAM189BP81408 668 aa16.21■□□□□ 0.18
LIG1-206ENST00000594067 ARF5P84085 180 aa16.21■□□□□ 0.18
LIG1-206ENST00000594067 LAPTM5Q13571 262 aa16.21■□□□□ 0.18
LIG1-206ENST00000594067 DNAJC14Q6Y2X3 702 aaPredicted RBP16.21■□□□□ 0.18
LIG1-206ENST00000594067 HS3ST5Q8IZT8 346 aa16.21■□□□□ 0.18
LIG1-206ENST00000594067 PDZD8Q8NEN9 1154 aa16.21■□□□□ 0.18
LIG1-206ENST00000594067 OR10A6Q8NH74 314 aa16.21■□□□□ 0.18
LIG1-206ENST00000594067 RAD21L1Q9H4I0 556 aa16.21■□□□□ 0.18
LIG1-206ENST00000594067 ILVBLA1L0T0 632 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 GRXCR2A6NFK2 248 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 FFAR2O15552 330 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 S100BP04271 92 aaPredicted RBP16.2■□□□□ 0.18
LIG1-206ENST00000594067 IL7RP16871 459 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 IDUAP35475 653 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 PPP1R8Q12972 351 aaKnown RBP16.2■□□□□ 0.18
LIG1-206ENST00000594067 TRAF3Q13114 568 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 AQP6Q13520 282 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 SPCS2Q15005 226 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 NKG7Q16617 165 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 RBM48Q5RL73 367 aaKnown RBP16.2■□□□□ 0.18
LIG1-206ENST00000594067 LDLRAP1Q5SW96 308 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 ANKRD34AQ69YU3 496 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 PRSS55Q6UWB4 352 aaPredicted RBP16.2■□□□□ 0.18
LIG1-206ENST00000594067 OR2T12Q8NG77 320 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 EID2BQ96D98 161 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 ZNF347Q96SE7 839 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 THUMPD3Q9BV44 507 aaKnown RBP16.2■□□□□ 0.18
LIG1-206ENST00000594067 TOR3AQ9H497 397 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 IKZF5Q9H5V7 419 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 TMEM45AQ9NWC5 275 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 MARCH5Q9NX47 278 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.2■□□□□ 0.18
LIG1-206ENST00000594067 PCDHB9Q9Y5E1 797 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 TTC36A6NLP5 189 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 SCAMP3O14828 347 aaKnown RBP16.2■□□□□ 0.18
LIG1-206ENST00000594067 CD160O95971 181 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 HTR1AP08908 422 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 CORO1AP31146 461 aaKnown RBP16.2■□□□□ 0.18
LIG1-206ENST00000594067 GGT5P36269 586 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 OPRL1P41146 370 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 GDF5P43026 501 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 CD300CQ08708 224 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 KIAA0040Q15053 153 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 SKIV2LQ15477 1246 aaKnown RBP16.2■□□□□ 0.18
LIG1-206ENST00000594067 TAS1R1Q7RTX1 841 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 BTLAQ7Z6A9 289 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 ADAMTSL2Q86TH1 951 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 TBCDQ9BTW9 1192 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 BEGAINQ9BUH8 593 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 HPS4Q9NQG7 708 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 FARSBQ9NSD9 589 aaKnown RBP16.2■□□□□ 0.18
LIG1-206ENST00000594067 ELOVL2Q9NXB9 296 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 SMPD4Q9NXE4 827 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 LIMD1Q9UGP4 676 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 PCDHGA8Q9Y5G5 932 aa16.2■□□□□ 0.18
LIG1-206ENST00000594067 TNPO3Q9Y5L0 923 aaKnown RBP16.2■□□□□ 0.18
LIG1-206ENST00000594067 PRMT5O14744 637 aaPredicted RBP16.19■□□□□ 0.18
LIG1-206ENST00000594067 NOBOXO60393 691 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 OTCP00480 354 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 ALPIP09923 528 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 JAK1P23458 1154 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 CA5AP35218 305 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 NKX3-2P78367 333 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 HMGCS1Q01581 520 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 SGO1Q5FBB7 561 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 PTRHD1Q6GMV3 140 aaKnown RBP16.19■□□□□ 0.18
LIG1-206ENST00000594067 SULT1C3Q6IMI6 304 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 TRAF7Q6Q0C0 670 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 PRR23BQ6ZRT6 265 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 ZDHHC13Q8IUH4 622 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 ABI1Q8IZP0 508 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 LKAAEAR1Q8TD35 194 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 SLC13A3Q8WWT9 602 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 WBP2Q969T9 261 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 SH3YL1Q96HL8 342 aaPredicted RBP16.19■□□□□ 0.18
LIG1-206ENST00000594067 ABHD8Q96I13 439 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 FUNDC2Q9BWH2 189 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 BOCQ9BWV1 1114 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 APOL5Q9BWW9 433 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 GPR63Q9BZJ6 419 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 CIPCQ9C0C6 399 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 ZFP14Q9HCL3 533 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 ADGRE2Q9UHX3 823 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 PKP3Q9Y446 797 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 G3V2T6 193 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 TAPBPO15533 448 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 COCHO43405 550 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 BCAS1O75363 584 aaPredicted RBP16.19■□□□□ 0.18
LIG1-206ENST00000594067 SLC11A1P49279 550 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 CACNG1Q06432 222 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 MTA1Q13330 715 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 OXA1LQ15070 435 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 FAM174BQ3ZCQ3 159 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 FUT10Q6P4F1 479 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 FAM151BQ6UXP7 276 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 SLC16A12Q6ZSM3 486 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 OR8J3Q8NGG0 315 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 HDAC2Q92769 488 aaKnown RBP16.19■□□□□ 0.18
LIG1-206ENST00000594067 MAGED4Q96JG8 741 aa16.19■□□□□ 0.18
LIG1-206ENST00000594067 IL17CQ9P0M4 197 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms