RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 ADAMTS17Q8TE56 1095 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 PPP1R2P1Q96PQ5 205 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 COG4Q9H9E3 785 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 ACTR5Q9H9F9 607 aaPredicted RBP22.01■■□□□ 1.11
SSBP4-203ENST00000593641 LUC7LQ9NQ29 371 aaKnown RBP22.01■■□□□ 1.11
SSBP4-203ENST00000593641 TCFL5Q9UL49 500 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 PCDHGB7Q9Y5F8 929 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 NOTCH2Q04721 2471 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 UTP20O75691 2785 aaKnown RBP22■■□□□ 1.11
SSBP4-203ENST00000593641 TMEM63AO94886 807 aa22■■□□□ 1.11
SSBP4-203ENST00000593641 GNLYP22749 145 aa22■■□□□ 1.11
SSBP4-203ENST00000593641 RORAP35398 523 aa22■■□□□ 1.11
SSBP4-203ENST00000593641 ZNF140P52738 457 aaPredicted RBP22■■□□□ 1.11
SSBP4-203ENST00000593641 OTUD4Q01804 1114 aaKnown RBP22■■□□□ 1.11
SSBP4-203ENST00000593641 PAPD7Q5XG87 772 aaKnown RBP22■■□□□ 1.11
SSBP4-203ENST00000593641 ZNF449Q6P9G9 518 aa22■■□□□ 1.11
SSBP4-203ENST00000593641 SYTL1Q8IYJ3 562 aa22■■□□□ 1.11
SSBP4-203ENST00000593641 ACTL9Q8TC94 416 aa22■■□□□ 1.11
SSBP4-203ENST00000593641 C19orf43Q9BQ61 176 aa22■■□□□ 1.11
SSBP4-203ENST00000593641 HIVEP3Q5T1R4 2406 aa22■■□□□ 1.11
SSBP4-203ENST00000593641 FER1L5A0AVI2 2057 aa21.99■■□□□ 1.11
SSBP4-203ENST00000593641 KCNN4O15554 427 aa21.99■■□□□ 1.11
SSBP4-203ENST00000593641 LCA5LO95447 670 aa21.99■■□□□ 1.11
SSBP4-203ENST00000593641 MSL3P1P0C860 447 aa21.99■■□□□ 1.11
SSBP4-203ENST00000593641 PRDX3P30048 256 aaKnown RBP21.99■■□□□ 1.11
SSBP4-203ENST00000593641 SPA17Q15506 151 aa21.99■■□□□ 1.11
SSBP4-203ENST00000593641 GPR33Q49SQ1 333 aa21.99■■□□□ 1.11
SSBP4-203ENST00000593641 LCN10Q6JVE6 187 aa21.99■■□□□ 1.11
SSBP4-203ENST00000593641 SARM1Q6SZW1 724 aa21.99■■□□□ 1.11
SSBP4-203ENST00000593641 OR1L3Q8NH93 324 aa21.99■■□□□ 1.11
SSBP4-203ENST00000593641 TBL1YQ9BQ87 522 aa21.99■■□□□ 1.11
SSBP4-203ENST00000593641 FAM96AQ9H5X1 160 aa21.99■■□□□ 1.11
SSBP4-203ENST00000593641 PCMTD2Q9NV79 361 aa21.99■■□□□ 1.11
SSBP4-203ENST00000593641 FEZ2Q9UHY8 353 aaPredicted RBP21.99■■□□□ 1.11
SSBP4-203ENST00000593641 SERTAD3Q9UJW9 196 aa21.99■■□□□ 1.11
SSBP4-203ENST00000593641 PCDHA13Q9Y5I0 950 aa21.99■■□□□ 1.11
SSBP4-203ENST00000593641 CCDC88CQ9P219 2028 aa21.99■■□□□ 1.11
SSBP4-203ENST00000593641 BTN3A1O00481 513 aa21.98■■□□□ 1.11
SSBP4-203ENST00000593641 DPM1O60762 260 aa21.98■■□□□ 1.11
SSBP4-203ENST00000593641 SORBS2O94875 1100 aaKnown RBP21.98■■□□□ 1.11
SSBP4-203ENST00000593641 RBP3P10745 1247 aa21.98■■□□□ 1.11
SSBP4-203ENST00000593641 ST6GAL1P15907 406 aa21.98■■□□□ 1.11
SSBP4-203ENST00000593641 MC4RP32245 332 aa21.98■■□□□ 1.11
SSBP4-203ENST00000593641 CTNNA1P35221 906 aaKnown RBP21.98■■□□□ 1.11
SSBP4-203ENST00000593641 LMAN1P49257 510 aa21.98■■□□□ 1.11
SSBP4-203ENST00000593641 VAV2P52735 878 aa21.98■■□□□ 1.11
SSBP4-203ENST00000593641 EIF3EP60228 445 aaKnown RBP21.98■■□□□ 1.11
SSBP4-203ENST00000593641 DARS2Q6PI48 645 aaKnown RBP21.98■■□□□ 1.11
SSBP4-203ENST00000593641 RNF214Q8ND24 703 aa21.98■■□□□ 1.11
SSBP4-203ENST00000593641 OR52E1Q8NGJ3 308 aa21.98■■□□□ 1.11
SSBP4-203ENST00000593641 SPATA13Q96N96 652 aa21.98■■□□□ 1.11
SSBP4-203ENST00000593641 PITPNM3Q9BZ71 974 aa21.98■■□□□ 1.11
SSBP4-203ENST00000593641 OSBPL8Q9BZF1 889 aa21.98■■□□□ 1.11
SSBP4-203ENST00000593641 OR52A5Q9H2C5 316 aa21.98■■□□□ 1.11
SSBP4-203ENST00000593641 TSPY26PQ9H489 355 aa21.98■■□□□ 1.11
SSBP4-203ENST00000593641 MVB12BQ9H7P6 319 aa21.98■■□□□ 1.11
SSBP4-203ENST00000593641 ZDHHC3Q9NYG2 299 aa21.98■■□□□ 1.11
SSBP4-203ENST00000593641 TFR2Q9UP52 801 aa21.98■■□□□ 1.11
SSBP4-203ENST00000593641 EFR3BQ9Y2G0 817 aa21.98■■□□□ 1.11
SSBP4-203ENST00000593641 PADI2Q9Y2J8 665 aa21.98■■□□□ 1.11
SSBP4-203ENST00000593641 MAP4K5Q9Y4K4 846 aa21.98■■□□□ 1.11
SSBP4-203ENST00000593641 C2orf74A8MZ97 194 aa21.97■■□□□ 1.11
SSBP4-203ENST00000593641 C9J4A7 227 aa21.97■■□□□ 1.11
SSBP4-203ENST00000593641 E7EQ34 232 aa21.97■■□□□ 1.11
SSBP4-203ENST00000593641 BTN3A3O00478 584 aa21.97■■□□□ 1.11
SSBP4-203ENST00000593641 PJA2O43164 708 aa21.97■■□□□ 1.11
SSBP4-203ENST00000593641 CEACAM4O75871 244 aa21.97■■□□□ 1.11
SSBP4-203ENST00000593641 CD151P48509 253 aa21.97■■□□□ 1.11
SSBP4-203ENST00000593641 RRADP55042 308 aa21.97■■□□□ 1.11
SSBP4-203ENST00000593641 ITGA1P56199 1179 aa21.97■■□□□ 1.11
SSBP4-203ENST00000593641 TBX2Q13207 712 aaPredicted RBP21.97■■□□□ 1.11
SSBP4-203ENST00000593641 C4orf17Q53FE4 359 aa21.97■■□□□ 1.11
SSBP4-203ENST00000593641 ZNF789Q5FWF6 425 aa21.97■■□□□ 1.11
SSBP4-203ENST00000593641 FAM198BQ6UWH4 519 aa21.97■■□□□ 1.11
SSBP4-203ENST00000593641 MED25Q71SY5 747 aa21.97■■□□□ 1.11
SSBP4-203ENST00000593641 HOOK3Q86VS8 718 aa21.97■■□□□ 1.11
SSBP4-203ENST00000593641 AMIGO1Q86WK6 493 aa21.97■■□□□ 1.11
SSBP4-203ENST00000593641 HPS6Q86YV9 775 aa21.97■■□□□ 1.11
SSBP4-203ENST00000593641 TMEM102Q8N9M5 508 aaPredicted RBP21.97■■□□□ 1.11
SSBP4-203ENST00000593641 FDCSPQ8NFU4 85 aa21.97■■□□□ 1.11
SSBP4-203ENST00000593641 CCDC110Q8TBZ0 833 aa21.97■■□□□ 1.11
SSBP4-203ENST00000593641 N4BP2L2Q92802 583 aaPredicted RBP21.97■■□□□ 1.11
SSBP4-203ENST00000593641 DPH2Q9BQC3 489 aaPredicted RBP21.97■■□□□ 1.11
SSBP4-203ENST00000593641 HGH1Q9BTY7 390 aa21.97■■□□□ 1.11
SSBP4-203ENST00000593641 TFB2MQ9H5Q4 396 aaKnown RBP21.97■■□□□ 1.11
SSBP4-203ENST00000593641 ANKRD12Q6UB98 2062 aa21.96■■□□□ 1.11
SSBP4-203ENST00000593641 CCL22O00626 93 aa21.96■■□□□ 1.11
SSBP4-203ENST00000593641 ZNF185O15231 689 aa21.96■■□□□ 1.11
SSBP4-203ENST00000593641 SNRNP200O75643 2136 aaKnown RBP21.96■■□□□ 1.11
SSBP4-203ENST00000593641 ZNF189O75820 626 aaPredicted RBP21.96■■□□□ 1.11
SSBP4-203ENST00000593641 HBQ1P09105 142 aa21.96■■□□□ 1.11
SSBP4-203ENST00000593641 AGXTP21549 392 aa21.96■■□□□ 1.11
SSBP4-203ENST00000593641 ACRV1P26436 265 aa21.96■■□□□ 1.11
SSBP4-203ENST00000593641 CETN2P41208 172 aa21.96■■□□□ 1.11
SSBP4-203ENST00000593641 RPA4Q13156 261 aa21.96■■□□□ 1.11
SSBP4-203ENST00000593641 MSLNQ13421 630 aaPredicted RBP21.96■■□□□ 1.11
SSBP4-203ENST00000593641 NCF4Q15080 339 aa21.96■■□□□ 1.11
SSBP4-203ENST00000593641 SKOR2Q2VWA4 1001 aaPredicted RBP21.96■■□□□ 1.11
SSBP4-203ENST00000593641 PTCHD3Q3KNS1 767 aa21.96■■□□□ 1.11
SSBP4-203ENST00000593641 ZRANB3Q5FWF4 1079 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms