RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 MIB2Q96AX9 1013 aa18.33■□□□□ 0.52
CCDC43-205ENST00000592333 FERD3LQ96RJ6 166 aa18.33■□□□□ 0.52
CCDC43-205ENST00000592333 NLNQ9BYT8 704 aa18.33■□□□□ 0.52
CCDC43-205ENST00000592333 CHRNA10Q9GZZ6 450 aa18.33■□□□□ 0.52
CCDC43-205ENST00000592333 MLXIPLQ9NP71 852 aa18.33■□□□□ 0.52
CCDC43-205ENST00000592333 SOHLH2Q9NX45 425 aa18.33■□□□□ 0.52
CCDC43-205ENST00000592333 SERTAD3Q9UJW9 196 aa18.33■□□□□ 0.52
CCDC43-205ENST00000592333 DUSP10Q9Y6W6 482 aa18.33■□□□□ 0.52
CCDC43-205ENST00000592333 SOWAHDA6NJG2 315 aa18.32■□□□□ 0.52
CCDC43-205ENST00000592333 MEN1O00255 615 aa18.32■□□□□ 0.52
CCDC43-205ENST00000592333 LIN7AO14910 233 aaPredicted RBP18.32■□□□□ 0.52
CCDC43-205ENST00000592333 HBQ1P09105 142 aa18.32■□□□□ 0.52
CCDC43-205ENST00000592333 NSG1P42857 185 aa18.32■□□□□ 0.52
CCDC43-205ENST00000592333 VAV2P52735 878 aa18.32■□□□□ 0.52
CCDC43-205ENST00000592333 GPS2Q13227 327 aa18.32■□□□□ 0.52
CCDC43-205ENST00000592333 OLIG2Q13516 323 aa18.32■□□□□ 0.52
CCDC43-205ENST00000592333 ITIH4Q14624 930 aa18.32■□□□□ 0.52
CCDC43-205ENST00000592333 GPR19Q15760 415 aa18.32■□□□□ 0.52
CCDC43-205ENST00000592333 FAM199XQ6PEV8 388 aaPredicted RBP18.32■□□□□ 0.52
CCDC43-205ENST00000592333 LINC00523Q86TU6 105 aa18.32■□□□□ 0.52
CCDC43-205ENST00000592333 DSELQ8IZU8 1212 aa18.32■□□□□ 0.52
CCDC43-205ENST00000592333 MR1Q95460 341 aa18.32■□□□□ 0.52
CCDC43-205ENST00000592333 CDKN2AIPNLQ96HQ2 116 aa18.32■□□□□ 0.52
CCDC43-205ENST00000592333 AKIRIN1Q9H9L7 192 aaPredicted RBP18.32■□□□□ 0.52
CCDC43-205ENST00000592333 AMFRQ9UKV5 643 aa18.32■□□□□ 0.52
CCDC43-205ENST00000592333 SLC9B1P1A6NJY1 282 aa18.31■□□□□ 0.52
CCDC43-205ENST00000592333 ERI2A8K979 691 aaKnown RBP18.31■□□□□ 0.52
CCDC43-205ENST00000592333 C2orf74A8MZ97 194 aa18.31■□□□□ 0.52
CCDC43-205ENST00000592333 PTMAP06454 111 aaKnown RBP18.31■□□□□ 0.52
CCDC43-205ENST00000592333 RORAP35398 523 aa18.31■□□□□ 0.52
CCDC43-205ENST00000592333 PREPP48147 710 aa18.31■□□□□ 0.52
CCDC43-205ENST00000592333 BOP1Q14137 746 aaKnown RBP18.31■□□□□ 0.52
CCDC43-205ENST00000592333 PLEKHS1Q5SXH7 462 aa18.31■□□□□ 0.52
CCDC43-205ENST00000592333 TMEM135Q86UB9 458 aa18.31■□□□□ 0.52
CCDC43-205ENST00000592333 SERPINA9Q86WD7 417 aa18.31■□□□□ 0.52
CCDC43-205ENST00000592333 AMIGO1Q86WK6 493 aa18.31■□□□□ 0.52
CCDC43-205ENST00000592333 LILRA3Q8N6C8 439 aaPredicted RBP18.31■□□□□ 0.52
CCDC43-205ENST00000592333 SLC38A9Q8NBW4 561 aa18.31■□□□□ 0.52
CCDC43-205ENST00000592333 TFGQ92734 400 aaPredicted RBP18.31■□□□□ 0.52
CCDC43-205ENST00000592333 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.31■□□□□ 0.52
CCDC43-205ENST00000592333 DNAJC1Q96KC8 554 aaKnown RBP18.31■□□□□ 0.52
CCDC43-205ENST00000592333 ALS2CR12Q96Q35 445 aa18.31■□□□□ 0.52
CCDC43-205ENST00000592333 C17orf62Q9BQA9 187 aa18.31■□□□□ 0.52
CCDC43-205ENST00000592333 DHRS4Q9BTZ2 278 aa18.31■□□□□ 0.52
CCDC43-205ENST00000592333 LACRTQ9GZZ8 138 aa18.31■□□□□ 0.52
CCDC43-205ENST00000592333 GRID2IPA4D2P6 1211 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 MROH6A6NGR9 719 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 F8W8V4 182 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 KDM1AO60341 852 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 AP2A1O95782 977 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 CD63P08962 238 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 STIP1P31948 543 aaKnown RBP18.3■□□□□ 0.52
CCDC43-205ENST00000592333 ZNF75DP51815 510 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 TMPRSS15P98073 1019 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 SRSF1Q07955 248 aaKnown RBP eCLIP18.3■□□□□ 0.52
CCDC43-205ENST00000592333 KLF1Q13351 362 aaPredicted RBP18.3■□□□□ 0.52
CCDC43-205ENST00000592333 IGFBP7Q16270 282 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 ZRANB3Q5FWF4 1079 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 PACS1Q6VY07 963 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 PEX26Q7Z412 305 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 OR52E1Q8NGJ3 308 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 ADAMTS17Q8TE56 1095 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 CLIP3Q96DZ5 547 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 TRAPPC9Q96Q05 1148 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 ING2Q9H160 280 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 CHST8Q9H2A9 424 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 FAM96AQ9H5X1 160 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 ACSS2Q9NR19 701 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 ANKMY1Q9P2S6 941 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 FAM8A1Q9UBU6 413 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 POLG2Q9UHN1 485 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 G3BP2Q9UN86 482 aaKnown RBP18.3■□□□□ 0.52
CCDC43-205ENST00000592333 REXO2Q9Y3B8 237 aaKnown RBP18.3■□□□□ 0.52
CCDC43-205ENST00000592333 LRRK2Q5S007 2527 aa18.3■□□□□ 0.52
CCDC43-205ENST00000592333 GSAPA4D1B5 854 aa18.29■□□□□ 0.52
CCDC43-205ENST00000592333 K7EM74 188 aa18.29■□□□□ 0.52
CCDC43-205ENST00000592333 BTN3A3O00478 584 aa18.29■□□□□ 0.52
CCDC43-205ENST00000592333 FTH1P02794 183 aa18.29■□□□□ 0.52
CCDC43-205ENST00000592333 PGDP52209 483 aa18.29■□□□□ 0.52
CCDC43-205ENST00000592333 SPARCL1Q14515 664 aa18.29■□□□□ 0.52
CCDC43-205ENST00000592333 ZNF789Q5FWF6 425 aa18.29■□□□□ 0.52
CCDC43-205ENST00000592333 LYPLAL1Q5VWZ2 237 aa18.29■□□□□ 0.52
CCDC43-205ENST00000592333 MED25Q71SY5 747 aa18.29■□□□□ 0.52
CCDC43-205ENST00000592333 TAS2R42Q7RTR8 314 aa18.29■□□□□ 0.52
CCDC43-205ENST00000592333 FAM26EQ8N5C1 309 aa18.29■□□□□ 0.52
CCDC43-205ENST00000592333 TMEM102Q8N9M5 508 aaPredicted RBP18.29■□□□□ 0.52
CCDC43-205ENST00000592333 FAM71DQ8N9W8 422 aa18.29■□□□□ 0.52
CCDC43-205ENST00000592333 SLC35B2Q8TB61 432 aa18.29■□□□□ 0.52
CCDC43-205ENST00000592333 SLC25A23Q9BV35 468 aa18.29■□□□□ 0.52
CCDC43-205ENST00000592333 TLR10Q9BXR5 811 aa18.29■□□□□ 0.52
CCDC43-205ENST00000592333 FRMD8P1Q9BZ68 369 aaPredicted RBP18.29■□□□□ 0.52
CCDC43-205ENST00000592333 ACTR5Q9H9F9 607 aaPredicted RBP18.29■□□□□ 0.52
CCDC43-205ENST00000592333 TCFL5Q9UL49 500 aa18.29■□□□□ 0.52
CCDC43-205ENST00000592333 RIMKLBQ9ULI2 386 aa18.29■□□□□ 0.52
CCDC43-205ENST00000592333 SNX7Q9UNH6 387 aa18.29■□□□□ 0.52
CCDC43-205ENST00000592333 NBASA2RRP1 2371 aa18.28■□□□□ 0.52
CCDC43-205ENST00000592333 TMEM150CB9EJG8 249 aa18.28■□□□□ 0.52
CCDC43-205ENST00000592333 E7EQ34 232 aa18.28■□□□□ 0.52
CCDC43-205ENST00000592333 BTN3A1O00481 513 aa18.28■□□□□ 0.52
CCDC43-205ENST00000592333 CEACAM4O75871 244 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms