RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 RPS3P23396 243 aaKnown RBP eCLIP17.73■□□□□ 0.43
DDX39A-212ENST00000590260 KPNA2P52292 529 aaKnown RBP17.73■□□□□ 0.43
DDX39A-212ENST00000590260 CSE1LP55060 971 aaKnown RBP17.73■□□□□ 0.43
DDX39A-212ENST00000590260 PLCL1Q15111 1095 aa17.73■□□□□ 0.43
DDX39A-212ENST00000590260 PPP1R7Q15435 360 aa17.73■□□□□ 0.43
DDX39A-212ENST00000590260 FBXO38Q6PIJ6 1188 aa17.73■□□□□ 0.43
DDX39A-212ENST00000590260 UNC5BQ8IZJ1 945 aa17.73■□□□□ 0.43
DDX39A-212ENST00000590260 ACVR1CQ8NER5 493 aa17.73■□□□□ 0.43
DDX39A-212ENST00000590260 OR4E2Q8NGC2 313 aa17.73■□□□□ 0.43
DDX39A-212ENST00000590260 PWWP2AQ96N64 755 aa17.73■□□□□ 0.43
DDX39A-212ENST00000590260 MAP3K3Q99759 626 aa17.73■□□□□ 0.43
DDX39A-212ENST00000590260 WDR83Q9BRX9 315 aaKnown RBP17.73■□□□□ 0.43
DDX39A-212ENST00000590260 HRASLS2Q9NWW9 162 aa17.73■□□□□ 0.43
DDX39A-212ENST00000590260 AKAP7Q9P0M2 348 aaPredicted RBP17.73■□□□□ 0.43
DDX39A-212ENST00000590260 GALPQ9UBC7 116 aa17.73■□□□□ 0.43
DDX39A-212ENST00000590260 ICKQ9UPZ9 632 aa17.73■□□□□ 0.43
DDX39A-212ENST00000590260 LIPCP11150 499 aa17.72■□□□□ 0.43
DDX39A-212ENST00000590260 AOAHP28039 575 aa17.72■□□□□ 0.43
DDX39A-212ENST00000590260 TTPAP49638 278 aa17.72■□□□□ 0.43
DDX39A-212ENST00000590260 SARNPP82979 210 aaKnown RBP17.72■□□□□ 0.43
DDX39A-212ENST00000590260 PRKG2Q13237 762 aa17.72■□□□□ 0.43
DDX39A-212ENST00000590260 AARS2Q5JTZ9 985 aaKnown RBP17.72■□□□□ 0.43
DDX39A-212ENST00000590260 CACHD1Q5VU97 1274 aa17.72■□□□□ 0.43
DDX39A-212ENST00000590260 ARMC3Q5W041 872 aa17.72■□□□□ 0.43
DDX39A-212ENST00000590260 TIPARPQ7Z3E1 657 aaKnown RBP17.72■□□□□ 0.43
DDX39A-212ENST00000590260 IGDCC3Q8IVU1 814 aa17.72■□□□□ 0.43
DDX39A-212ENST00000590260 SLC22A15Q8IZD6 547 aa17.72■□□□□ 0.43
DDX39A-212ENST00000590260 ZNF669Q96BR6 464 aaPredicted RBP17.72■□□□□ 0.43
DDX39A-212ENST00000590260 SLC41A2Q96JW4 573 aa17.72■□□□□ 0.43
DDX39A-212ENST00000590260 HGH1Q9BTY7 390 aa17.72■□□□□ 0.43
DDX39A-212ENST00000590260 TFB2MQ9H5Q4 396 aaKnown RBP17.72■□□□□ 0.43
DDX39A-212ENST00000590260 XKR8Q9H6D3 395 aa17.72■□□□□ 0.43
DDX39A-212ENST00000590260 ASIC3Q9UHC3 531 aa17.72■□□□□ 0.43
DDX39A-212ENST00000590260 ANAPC5Q9UJX4 755 aa17.72■□□□□ 0.43
DDX39A-212ENST00000590260 HEBP2Q9Y5Z4 205 aa17.72■□□□□ 0.43
DDX39A-212ENST00000590260 COLEC10Q9Y6Z7 277 aa17.72■□□□□ 0.43
DDX39A-212ENST00000590260 PTPRQQ9UMZ3 2332 aa17.72■□□□□ 0.43
DDX39A-212ENST00000590260 BTN3A1O00481 513 aa17.71■□□□□ 0.43
DDX39A-212ENST00000590260 TTI1O43156 1089 aa17.71■□□□□ 0.43
DDX39A-212ENST00000590260 POLR2CP19387 275 aaPredicted RBP17.71■□□□□ 0.43
DDX39A-212ENST00000590260 NDUFS1P28331 727 aa17.71■□□□□ 0.43
DDX39A-212ENST00000590260 DHX34Q14147 1143 aaKnown RBP17.71■□□□□ 0.43
DDX39A-212ENST00000590260 GRB7Q14451 532 aa17.71■□□□□ 0.43
DDX39A-212ENST00000590260 IZUMO3Q5VZ72 239 aa17.71■□□□□ 0.43
DDX39A-212ENST00000590260 CASC4Q6P4E1 433 aa17.71■□□□□ 0.43
DDX39A-212ENST00000590260 VASH2Q86V25 355 aa17.71■□□□□ 0.43
DDX39A-212ENST00000590260 DENND6AQ8IWF6 608 aa17.71■□□□□ 0.43
DDX39A-212ENST00000590260 ADGRF3Q8IZF5 1079 aa17.71■□□□□ 0.43
DDX39A-212ENST00000590260 ZDHHC12Q96GR4 267 aa17.71■□□□□ 0.43
DDX39A-212ENST00000590260 BBC3Q96PG8 261 aaPredicted RBP17.71■□□□□ 0.43
DDX39A-212ENST00000590260 TTC1Q99614 292 aa17.71■□□□□ 0.43
DDX39A-212ENST00000590260 MENTQ9BUN1 341 aa17.71■□□□□ 0.43
DDX39A-212ENST00000590260 MVB12BQ9H7P6 319 aa17.71■□□□□ 0.43
DDX39A-212ENST00000590260 MED16Q9Y2X0 877 aa17.71■□□□□ 0.43
DDX39A-212ENST00000590260 RPS6KL1Q9Y6S9 549 aa17.71■□□□□ 0.43
DDX39A-212ENST00000590260 TEX51A0A1B0GUA7 166 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 IFRD1O00458 451 aaPredicted RBP17.7■□□□□ 0.42
DDX39A-212ENST00000590260 NIPSNAP2O75323 286 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 RASSF9O75901 435 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 SLCO2B1O94956 709 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 S1PR4O95977 384 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 FOLR1P15328 257 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 ZNF28P17035 718 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 NELFEP18615 380 aaKnown RBP17.7■□□□□ 0.42
DDX39A-212ENST00000590260 OGNP20774 298 aaKnown RBP17.7■□□□□ 0.42
DDX39A-212ENST00000590260 FMO4P31512 558 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 EIF3BP55884 814 aaKnown RBP17.7■□□□□ 0.42
DDX39A-212ENST00000590260 CXADRP78310 365 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 MRPS25P82663 173 aaKnown RBP17.7■□□□□ 0.42
DDX39A-212ENST00000590260 DHX9Q08211 1270 aaKnown RBP17.7■□□□□ 0.42
DDX39A-212ENST00000590260 HSPA14Q0VDF9 509 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 GBX1Q14549 363 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 KCNAB1Q14722 419 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 DCAF12Q5T6F0 453 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 NEPROQ6NW34 567 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 PCSK4Q6UW60 755 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 OOSP2Q86WS3 158 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 CILP2Q8IUL8 1156 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 LMNTD1Q8N9Z9 388 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 FLVCR1-AS1Q8TAF5 88 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 SNRNP27Q8WVK2 155 aaKnown RBP17.7■□□□□ 0.42
DDX39A-212ENST00000590260 NKD1Q969G9 470 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 PILRAQ9UKJ1 303 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 POMT2Q9UKY4 750 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 ZFYVE26Q68DK2 2539 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 MGAQ8IWI9 3026 aa17.7■□□□□ 0.42
DDX39A-212ENST00000590260 UBA6A0AVT1 1052 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-212ENST00000590260 MAGEB16A2A368 324 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 TLCD2A6NGC4 264 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 NDUFS3O75489 264 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 USP1O94782 785 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 TIAF1O95411 115 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 DLGAP3O95886 979 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 CD82P27701 267 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 PEBP1P30086 187 aaKnown RBP17.69■□□□□ 0.42
DDX39A-212ENST00000590260 RAB15P59190 212 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 ETF1P62495 437 aaKnown RBP17.69■□□□□ 0.42
DDX39A-212ENST00000590260 DR1Q01658 176 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 SYTL3Q4VX76 610 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 DNTTIP2Q5QJE6 756 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms