RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 ANAPC5Q9UJX4 755 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 ACSL5Q9ULC5 683 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 WDR37Q9Y2I8 494 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 RAXQ9Y2V3 346 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 APC2O95996 2303 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 PIKFYVEQ9Y2I7 2098 aa10.15□□□□□ -0.79
SDF2-208ENST00000589788 TCRBV7S3A2A0A539 114 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 LILRA5A6NI73 299 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 F8W8V4 182 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 AGRPO00253 132 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 TAF4O00268 1085 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 QSOX1O00391 747 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 SGTAO43765 313 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 AP2A2O94973 939 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 TNFSF15O95150 251 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 POLBP06746 335 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 AMD1P17707 334 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 CSF2RBP32927 897 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 NSG1P42857 185 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 MAGEA6P43360 314 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 LIMK2P53671 638 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 ACVR1Q04771 509 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 SQSTM1Q13501 440 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 CLCA4Q14CN2 919 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 RPE65Q16518 533 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 TBC1D25Q3MII6 688 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 AARS2Q5JTZ9 985 aaKnown RBP10.14□□□□□ -0.79
SDF2-208ENST00000589788 CASC4Q6P4E1 433 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 WDR74Q6RFH5 385 aaPredicted RBP10.14□□□□□ -0.79
SDF2-208ENST00000589788 TMEM26Q6ZUK4 368 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 TMPRSS9Q7Z410 1059 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 SLITRK4Q8IW52 837 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 CFAP206Q8IYR0 622 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 CLDN19Q8N6F1 224 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 OR4D9Q8NGE8 314 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 HM13Q8TCT9 377 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 CPT1BQ92523 772 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 FGF11Q92914 225 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 LINC00615Q96LM1 132 aaPredicted RBP10.14□□□□□ -0.79
SDF2-208ENST00000589788 CCDC74BQ96LY2 380 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 ZNF578Q96N58 590 aaPredicted RBP10.14□□□□□ -0.79
SDF2-208ENST00000589788 TBC1D10AQ9BXI6 508 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 WWP1Q9H0M0 922 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 DDX47Q9H0S4 455 aaKnown RBP10.14□□□□□ -0.79
SDF2-208ENST00000589788 C12orf49Q9H741 205 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 UCK1Q9HA47 277 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 SLC40A1Q9NP59 571 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 LATS2Q9NRM7 1088 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 IMP3Q9NV31 184 aaKnown RBP10.14□□□□□ -0.79
SDF2-208ENST00000589788 SYBUQ9NX95 663 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 SAMD15Q9P1V8 674 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 PISDQ9UG56 409 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 LOXL2Q9Y4K0 774 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 PCDHGA8Q9Y5G5 932 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 USP24Q9UPU5 2620 aa10.14□□□□□ -0.79
SDF2-208ENST00000589788 URB1O60287 2271 aaKnown RBP10.13□□□□□ -0.79
SDF2-208ENST00000589788 IGHV5-10-1A0A0J9YXX1 117 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 C17orf113A0A1B0GUU1 675 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 A0A1W2PNU3 283 aaPredicted RBP10.13□□□□□ -0.79
SDF2-208ENST00000589788 PMS2P1A4D2B8 440 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 HGSO14964 777 aaPredicted RBP10.13□□□□□ -0.79
SDF2-208ENST00000589788 RRP8O43159 456 aaKnown RBP10.13□□□□□ -0.79
SDF2-208ENST00000589788 FTH1P02794 183 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 ITGA2BP08514 1039 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 GSTM1P09488 218 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 OR56A5P0C7T3 313 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 MTHFD1P11586 935 aaKnown RBP10.13□□□□□ -0.79
SDF2-208ENST00000589788 MLNP12872 115 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 TYRP1P17643 537 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 NMBRP28336 390 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 ERVPABLB-1P60509 514 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 GSTM4Q03013 218 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 C2orf54Q08AI8 447 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 TRA2AQ13595 282 aaKnown RBP eCLIP10.13□□□□□ -0.79
SDF2-208ENST00000589788 GPR18Q14330 331 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 KRT33BQ14525 404 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 SNAP47Q5SQN1 464 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 ANKRD22Q5VYY1 191 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 ARMC3Q5W041 872 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 TMEM71Q6P5X7 295 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 IGF2-ASQ6U949 168 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 PACS1Q6VY07 963 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 ZNF574Q6ZN55 896 aaPredicted RBP10.13□□□□□ -0.79
SDF2-208ENST00000589788 ZNF534Q76KX8 674 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 JAMLQ86YT9 394 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 KLHL7Q8IXQ5 586 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 MMGT1Q8N4V1 131 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 OTUD6BQ8N6M0 293 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 MCUQ8NE86 351 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 CRELD1Q96HD1 420 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 SGSM3Q96HU1 749 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 C12orf66Q96MD2 445 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 RUNDC3BQ96NL0 473 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 SLC46A1Q96NT5 459 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 KIFC1Q9BW19 673 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 MRM3Q9HC36 420 aaKnown RBP10.13□□□□□ -0.79
SDF2-208ENST00000589788 XAB2Q9HCS7 855 aaKnown RBP10.13□□□□□ -0.79
SDF2-208ENST00000589788 CATSPERZQ9NTU4 200 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 ASIC3Q9UHC3 531 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 PCYOX1Q9UHG3 505 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms