RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 GUCA1CO95843 209 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 ARSAP15289 507 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 ACADSP16219 412 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 PSMC3P17980 439 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 MAP4P27816 1152 aaKnown RBP10.18□□□□□ -0.78
VPS25-203ENST00000589520 ETV3P41162 512 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 SLC6A11P48066 632 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 HSPA7P48741 367 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 PRLHRP49683 370 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 PCDH1Q08174 1060 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 HSPA14Q0VDF9 509 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 TMEM115Q12893 351 aaPredicted RBP10.18□□□□□ -0.78
VPS25-203ENST00000589520 TRAF3Q13114 568 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 PRKG2Q13237 762 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 GTF2H3Q13889 308 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 FLOT2Q14254 428 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 TRIM25Q14258 630 aaKnown RBP10.18□□□□□ -0.78
VPS25-203ENST00000589520 PHKG1Q16816 387 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 MUM1Q2TAK8 710 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 GAB4Q2WGN9 574 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 MAP7D1Q3KQU3 841 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 BCL7AQ4VC05 210 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 C6orf136Q5SQH8 315 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 C8orf82Q6P1X6 216 aaPredicted RBP10.18□□□□□ -0.78
VPS25-203ENST00000589520 PAOXQ6QHF9 649 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 IL27RAQ6UWB1 636 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 Q6ZSR9 355 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 ERN2Q76MJ5 926 aaKnown RBP10.18□□□□□ -0.78
VPS25-203ENST00000589520 PARS2Q7L3T8 475 aaKnown RBP10.18□□□□□ -0.78
VPS25-203ENST00000589520 GET4Q7L5D6 327 aaPredicted RBP10.18□□□□□ -0.78
VPS25-203ENST00000589520 ARPINQ7Z6K5 226 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 C12orf40Q86WS4 652 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 RASGRP3Q8IV61 690 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 FUNDC1Q8IVP5 155 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 KLHDC8AQ8IYD2 350 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 GOLM1Q8NBJ4 401 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 GLB1L3Q8NCI6 653 aaPredicted RBP10.18□□□□□ -0.78
VPS25-203ENST00000589520 FBXO15Q8NCQ5 510 aaPredicted RBP10.18□□□□□ -0.78
VPS25-203ENST00000589520 CATSPER1Q8NEC5 780 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 HMGCLL1Q8TB92 370 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 SLC26A7Q8TE54 656 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 DNAJC9Q8WXX5 260 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 SORCS1Q8WY21 1168 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 ELMO1Q92556 727 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 GLMNQ92990 594 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 SCAMP4Q969E2 229 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 TMEM159Q96B96 161 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 ELSPBP1Q96BH3 223 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 FBXL8Q96CD0 374 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 METTL2AQ96IZ6 378 aaKnown RBP10.18□□□□□ -0.78
VPS25-203ENST00000589520 MARK4Q96L34 752 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 LINC00615Q96LM1 132 aaPredicted RBP10.18□□□□□ -0.78
VPS25-203ENST00000589520 CCDC138Q96M89 665 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 KCNA7Q96RP8 456 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 NPAS2Q99743 824 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 PBX4Q9BYU1 374 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 NSUN3Q9H649 340 aaKnown RBP10.18□□□□□ -0.78
VPS25-203ENST00000589520 HEBP1Q9NRV9 189 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 ASIC5Q9NY37 505 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 C6orf203Q9P0P8 240 aaPredicted RBP10.18□□□□□ -0.78
VPS25-203ENST00000589520 TMEM181Q9P2C4 612 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 LEF1Q9UJU2 399 aaPredicted RBP10.18□□□□□ -0.78
VPS25-203ENST00000589520 TMPRSS11EQ9UL52 423 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 SNX6Q9UNH7 406 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 PSMD13Q9UNM6 376 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 GPR34Q9UPC5 381 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 PDE10AQ9Y233 779 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 AP3M1Q9Y2T2 418 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 TIMM22Q9Y584 194 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 PCDHGA7Q9Y5G6 932 aa10.18□□□□□ -0.78
VPS25-203ENST00000589520 DNMT3AQ9Y6K1 912 aaPredicted RBP10.18□□□□□ -0.78
VPS25-203ENST00000589520 ZNF106Q9H2Y7 1883 aaKnown RBP10.18□□□□□ -0.78
VPS25-203ENST00000589520 NUP210Q8TEM1 1887 aaPredicted RBP10.17□□□□□ -0.78
VPS25-203ENST00000589520 KLHL33A6NCF5 533 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 ARNTLO00327 626 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 FBP2O00757 339 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 LIN7AO14910 233 aaPredicted RBP10.17□□□□□ -0.78
VPS25-203ENST00000589520 PEX1O43933 1283 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 LZTS3O60299 673 aaPredicted RBP10.17□□□□□ -0.78
VPS25-203ENST00000589520 DNAJA2O60884 412 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 PSIP1O75475 530 aaKnown RBP10.17□□□□□ -0.78
VPS25-203ENST00000589520 PDE5AO76074 875 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 CATP04040 527 aaKnown RBP10.17□□□□□ -0.78
VPS25-203ENST00000589520 APODP05090 189 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 ADRB3P13945 408 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 ACPPP15309 386 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 PRPH2P23942 346 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 FCARP24071 287 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 PRDX3P30048 256 aaKnown RBP10.17□□□□□ -0.78
VPS25-203ENST00000589520 ARL1P40616 181 aaPredicted RBP10.17□□□□□ -0.78
VPS25-203ENST00000589520 MAGEA10P43363 369 aaPredicted RBP10.17□□□□□ -0.78
VPS25-203ENST00000589520 GNPDA1P46926 289 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 SLC6A12P48065 614 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 BNIP2Q12982 314 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 CCNIQ14094 377 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 GRB7Q14451 532 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 ZNF234Q14588 700 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 TAF11Q15544 211 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 TCEAL5Q5H9L2 206 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 C10orf62Q5T681 223 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms