RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	AAK1	Q2M2I8	961 aa		15.13	■□□□□ 0.01
DDX39A-209	ENST00000589318	UNC50	Q53HI1	259 aa		15.13	■□□□□ 0.01
DDX39A-209	ENST00000589318	VWA5B1	Q5TIE3	1220 aa		15.13	■□□□□ 0.01
DDX39A-209	ENST00000589318	TXNDC11	Q6PKC3	985 aa		15.13	■□□□□ 0.01
DDX39A-209	ENST00000589318	KBTBD6	Q86V97	674 aa		15.13	■□□□□ 0.01
DDX39A-209	ENST00000589318	TRAM1L1	Q8N609	369 aa		15.13	■□□□□ 0.01
DDX39A-209	ENST00000589318	PTGR2	Q8N8N7	351 aa	Predicted RBP	15.13	■□□□□ 0.01
DDX39A-209	ENST00000589318	AGR3	Q8TD06	166 aa		15.13	■□□□□ 0.01
DDX39A-209	ENST00000589318	ERLEC1	Q96DZ1	483 aa		15.13	■□□□□ 0.01
DDX39A-209	ENST00000589318	WRAP53	Q9BUR4	548 aa	Known RBP	15.13	■□□□□ 0.01
DDX39A-209	ENST00000589318	SHCBP1L	Q9BZQ2	653 aa		15.13	■□□□□ 0.01
DDX39A-209	ENST00000589318	GRIP2	Q9C0E4	1043 aa		15.13	■□□□□ 0.01
DDX39A-209	ENST00000589318	TNFRSF12A	Q9NP84	129 aa		15.13	■□□□□ 0.01
DDX39A-209	ENST00000589318	TRPV5	Q9NQA5	729 aa		15.13	■□□□□ 0.01
DDX39A-209	ENST00000589318	PFDN4	Q9NQP4	134 aa		15.13	■□□□□ 0.01
DDX39A-209	ENST00000589318	TBC1D23	Q9NUY8	699 aa		15.13	■□□□□ 0.01
DDX39A-209	ENST00000589318	SUN2	Q9UH99	717 aa		15.13	■□□□□ 0.01
DDX39A-209	ENST00000589318	CD207	Q9UJ71	328 aa		15.13	■□□□□ 0.01
DDX39A-209	ENST00000589318	RNF112	Q9ULX5	631 aa		15.13	■□□□□ 0.01
DDX39A-209	ENST00000589318	HTR3E	A5X5Y0	456 aa		15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318	GRXCR2	A6NFK2	248 aa		15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318	LRRC14B	A6NHZ5	514 aa		15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318		H0YJX3	145 aa		15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318		H3BQ06	376 aa	Predicted RBP	15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318	GRID2	O43424	1007 aa		15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318	KLK8	O60259	260 aa		15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318	TRIM16	O95361	564 aa		15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318	IGFBP4	P22692	258 aa		15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318	RPL14	P50914	215 aa	Known RBP	15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318	HERVK_113	P63132	956 aa		15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318	RNF111	Q6ZNA4	994 aa		15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318	PQLC1	Q8N2U9	271 aa		15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318	FBXO27	Q8NI29	283 aa		15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318	CMTM5	Q96DZ9	223 aa		15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318	DCUN1D1	Q96GG9	259 aa		15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318	PPP1R16A	Q96I34	528 aa		15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318	ZSCAN5A	Q9BUG6	496 aa		15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318	ERVK-6	Q9BXR3	956 aa		15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318	COG4	Q9H9E3	785 aa		15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318	RAD18	Q9NS91	495 aa		15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318	CNOT11	Q9UKZ1	510 aa	Known RBP	15.12	■□□□□ 0.01
DDX39A-209	ENST00000589318	SGTA	O43765	313 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	SIX3	O95343	332 aa	Predicted RBP	15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	ZNF23	P17027	643 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	WAS	P42768	502 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	ELP6	Q0PNE2	266 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	GALNT1	Q10472	559 aa	Predicted RBP	15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	PFKFB4	Q16877	469 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	EPGN	Q6UW88	154 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	ERN2	Q76MJ5	926 aa	Known RBP	15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	NRSN1	Q8IZ57	195 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	PELI3	Q8N2H9	469 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	DDHD1	Q8NEL9	900 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	DTD2	Q96FN9	168 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	CCT7	Q99832	543 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	P2RY13	Q9BPV8	354 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	UBAP1	Q9NZ09	502 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	PRR5-ARHGAP8	B1AHC4	643 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	TMEM233	B4DJY2	109 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	SUPT3H	B4E1H0	165 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	UBFD1	O14562	309 aa	Known RBP	15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	MTX2	O75431	263 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	SERPINB7	O75635	380 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	SOD1	P00441	154 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	DRD3	P35462	400 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	P2RY2	P41231	377 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	TNFRSF4	P43489	277 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	PSMD8	P48556	350 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	TUBA4A	P68366	448 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	ARHGAP8	P85298	464 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	RELA	Q04206	551 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	CAMK2G	Q13555	558 aa	Predicted RBP	15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	ACOX1	Q15067	660 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	LRRC36	Q1X8D7	754 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	SLC9B1	Q4ZJI4	515 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	C2orf27A	Q580R0	203 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	SBSN	Q6UWP8	590 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	NUDT18	Q6ZVK8	323 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	CYP2U1	Q7Z449	544 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	DSG4	Q86SJ6	1040 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	RAVER1	Q8IY67	606 aa	Known RBP	15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	CHPF	Q8IZ52	775 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	FBXW8	Q8N3Y1	598 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	ZBTB2	Q8N680	514 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	RILP	Q96NA2	401 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	VPS35	Q96QK1	796 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	HDAC8	Q9BY41	377 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	INIP	Q9NRY2	104 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	COQ6	Q9Y2Z9	468 aa		15.11	■□□□□ 0.01
DDX39A-209	ENST00000589318	SYCE1L	A8MT33	242 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	C2CD4D	B7Z1M9	353 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	C1QTNF3-AMACR	E9PGA6	284 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	WNT9A	O14904	365 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	HDAC3	O15379	428 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	EIF2S1	P05198	315 aa	Known RBP	15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	JUN	P05412	331 aa	Known RBP	15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	ATP1B2	P14415	290 aa	Predicted RBP	15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	CCR7	P32248	378 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	CTH	P32929	405 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	HK2	P52789	917 aa		15.1	■□□□□ 0.01

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms