RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 KATNA1O75449 491 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 OR4F21O95013 312 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 PRAMEF1O95521 474 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 LDLRP01130 860 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 URODP06132 367 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 HTR1EP28566 365 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 SERPINA4P29622 427 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 AKT1P31749 480 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 CDKL1Q00532 357 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 MYBPC1Q00872 1141 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 ECT2LQ008S8 904 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 PLOD1Q02809 727 aaPredicted RBP7.28□□□□□ -1.24
ZNF540-206ENST00000589117 GTF2H2Q13888 395 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 CAPRIN1Q14444 709 aaKnown RBP7.28□□□□□ -1.24
ZNF540-206ENST00000589117 MPP7Q5T2T1 576 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 CACHD1Q5VU97 1274 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 SULT1C3Q6IMI6 304 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 GTF2H2CQ6P1K8 395 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 RBM44Q6ZP01 1051 aaKnown RBP7.28□□□□□ -1.24
ZNF540-206ENST00000589117 SERPINA9Q86WD7 417 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 IFNEQ86WN2 208 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 CHERPQ8IWX8 916 aaKnown RBP7.28□□□□□ -1.24
ZNF540-206ENST00000589117 DPP10Q8N608 796 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 GLB1L3Q8NCI6 653 aaPredicted RBP7.28□□□□□ -1.24
ZNF540-206ENST00000589117 TMEM125Q96AQ2 219 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 EGFL8Q99944 293 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 HTATIP2Q9BUP3 242 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 SLC2A11Q9BYW1 496 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 P2RY12Q9H244 342 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 HIPK3Q9H422 1215 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 CAAP1Q9H8G2 361 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 IPPKQ9H8X2 491 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 HEBP1Q9NRV9 189 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 AGPAT4Q9NRZ5 378 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 CMTM6Q9NX76 183 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 SMPD4Q9NXE4 827 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 TUBA8Q9NY65 449 aaPredicted RBP7.28□□□□□ -1.24
ZNF540-206ENST00000589117 OPTCQ9UBM4 332 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 LHX3Q9UBR4 397 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 VPS51Q9UID3 782 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 CRLS1Q9UJA2 301 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 VWA8A3KMH1 1905 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 A0A087WXM4 84 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 C1orf232A0A0U1RR37 186 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 CXorf51AA0A1B0GTR3 108 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.27□□□□□ -1.25
ZNF540-206ENST00000589117 C7orf72A4D263 438 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 C2orf78A6NCI8 922 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 ARNTLO00327 626 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 TULP3O75386 442 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 SEC24AO95486 1093 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 IGSF6O95976 241 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 GLUD1P00367 558 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 CAPN1P07384 714 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 SMIM18P0DKX4 95 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 CBSLP0DN79 551 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 ARSAP15289 507 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 CBSP35520 551 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 GSK3BP49841 420 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 SGSHP51688 502 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 UFM1P61960 85 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 CREMQ03060 361 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 LSAMPQ13449 338 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 NFATC2Q13469 925 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 AP5B1Q2VPB7 878 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 FUT11Q495W5 492 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 PITRM1Q5JRX3 1037 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 CDKL4Q5MAI5 379 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 ZDHHC20Q5W0Z9 365 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 NANOGP8Q6NSW7 305 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 TTC33Q6PID6 262 aaPredicted RBP7.27□□□□□ -1.25
ZNF540-206ENST00000589117 ADAMTSL4Q6UY14 1074 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 FKBP9P1Q75LS8 142 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 LYSMD3Q7Z3D4 306 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 CARM1Q86X55 608 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 ZFAND4Q86XD8 727 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 PGBD3Q8N328 593 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 CBARPQ8N350 705 aaPredicted RBP7.27□□□□□ -1.25
ZNF540-206ENST00000589117 PDPRQ8NCN5 879 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 DNAJB8Q8NHS0 232 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 TFAP2CQ92754 450 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 VPS33AQ96AX1 596 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 ULK4Q96C45 1275 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 ASIC4Q96FT7 647 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 NSMCE2Q96MF7 247 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 ZNF558Q96NG5 402 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 ACOX2Q99424 681 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 OSBPL6Q9BZF3 934 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 GSX2Q9BZM3 304 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 NANOGQ9H9S0 305 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 GIMAP2Q9UG22 337 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 OARD1Q9Y530 152 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 GLYATL1P3A0A0U1RQE8 302 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 FIGNL2A6NMB9 653 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 FXYD1O00168 92 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 PDPK1O15530 556 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 PQBP1O60828 265 aaKnown RBP7.27□□□□□ -1.25
ZNF540-206ENST00000589117 ULK1O75385 1050 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 ARHGEF15O94989 841 aa7.27□□□□□ -1.25
ZNF540-206ENST00000589117 SLC25A14O95258 325 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms