RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 DEFB124Q8NES8 71 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 ANKRD20A12PQ8NF67 263 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 TSTD1Q8NFU3 115 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 CCDC26Q8TAB7 109 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 CLEC4CQ8WTT0 213 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 SHC3Q92529 594 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 MRPS31Q92665 395 aaKnown RBP7.76□□□□□ -1.17
ATG4D-210ENST00000588972 FBXO32Q969P5 355 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 TRMT61AQ96FX7 289 aaKnown RBP7.76□□□□□ -1.17
ATG4D-210ENST00000588972 VPS50Q96JG6 964 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 CYP2S1Q96SQ9 504 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 P2RY13Q9BPV8 354 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 DUSP16Q9BY84 665 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 DNAI2Q9GZS0 605 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 GANQ9H2C0 597 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 CCDC68Q9H2F9 335 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 PDCL3Q9H2J4 239 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 SLC32A1Q9H598 525 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 TLR8Q9NR97 1041 aaKnown RBP7.76□□□□□ -1.17
ATG4D-210ENST00000588972 FAM207AQ9NSI2 230 aaPredicted RBP7.76□□□□□ -1.17
ATG4D-210ENST00000588972 CCL26Q9Y258 94 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 THADAQ6YHU6 1953 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 APC2O95996 2303 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 MAST4O15021 2626 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 KRTAP23-1A1A580 65 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 ZNF840PA6NDX5 716 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 PATE3B3GLJ2 98 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 TAF4O00268 1085 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 TULP3O75386 442 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 PMPCBO75439 489 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 URI1O94763 535 aaPredicted RBP7.75□□□□□ -1.17
ATG4D-210ENST00000588972 TNNT1P13805 278 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 UCHL3P15374 230 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 EPHA8P29322 1005 aaPredicted RBP7.75□□□□□ -1.17
ATG4D-210ENST00000588972 PCP4P48539 62 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 RGS7P49802 495 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 CLCN2P51788 898 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 TAS2R50P59544 299 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 POLR2FP61218 127 aaKnown RBP7.75□□□□□ -1.17
ATG4D-210ENST00000588972 TLE3Q04726 772 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 DEUP1Q05D60 604 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 CBFBQ13951 182 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 ZNF268Q14587 947 aaPredicted RBP7.75□□□□□ -1.17
ATG4D-210ENST00000588972 DRAP1Q14919 205 aaPredicted RBP7.75□□□□□ -1.17
ATG4D-210ENST00000588972 BEAN1Q3B7T3 259 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 USP39Q53GS9 565 aaKnown RBP7.75□□□□□ -1.17
ATG4D-210ENST00000588972 ACSM6Q6P461 480 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 INO80CQ6PI98 192 aaPredicted RBP7.75□□□□□ -1.17
ATG4D-210ENST00000588972 LCLAT1Q6UWP7 414 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 ENOSF1Q7L5Y1 443 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 CPLX4Q7Z7G2 160 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 SLC47A2Q86VL8 602 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 MON1AQ86VX9 555 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 ARL14EPQ8N8R7 260 aaPredicted RBP7.75□□□□□ -1.17
ATG4D-210ENST00000588972 NFKBIDQ8NI38 313 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 NDRG1Q92597 394 aaKnown RBP7.75□□□□□ -1.17
ATG4D-210ENST00000588972 CD101Q93033 1021 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 ATP2A3Q93084 1043 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 PRR11Q96HE9 360 aaPredicted RBP7.75□□□□□ -1.17
ATG4D-210ENST00000588972 CEP295NLQ96MC4 621 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 NAP1L5Q96NT1 182 aaPredicted RBP7.75□□□□□ -1.17
ATG4D-210ENST00000588972 SLITRK1Q96PX8 696 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 SLC25A18Q9H1K4 315 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 TSPY26PQ9H489 355 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 SYNPO2LQ9H987 977 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 SAP30LQ9HAJ7 183 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 FBRSL1Q9HCM7 1045 aaKnown RBP7.75□□□□□ -1.17
ATG4D-210ENST00000588972 HAUS2Q9NVX0 235 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 OSER1Q9NX31 292 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 NKIRAS2Q9NYR9 191 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 TBC1D14Q9P2M4 693 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 CHORDC1Q9UHD1 332 aaPredicted RBP7.75□□□□□ -1.17
ATG4D-210ENST00000588972 VPS28Q9UK41 221 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 BPTFQ12830 3046 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 PCNX2A6NKB5 2137 aa7.75□□□□□ -1.17
ATG4D-210ENST00000588972 TNRC6BQ9UPQ9 1833 aaKnown RBP7.74□□□□□ -1.17
ATG4D-210ENST00000588972 TRAV19A0A0A6YYK7 116 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 FAM92AA1XBS5 289 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 FAM90A7PA6NKC0 464 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 FAM90A22PA8MWA6 464 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 FAM90A12PA8MX19 464 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 FAM90A23PA8MXZ1 464 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 F8VZ95 297 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 H0Y626 953 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 XPO1O14980 1071 aaKnown RBP7.74□□□□□ -1.17
ATG4D-210ENST00000588972 MDM4O15151 490 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 TRIM16O95361 564 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 MLYCDO95822 493 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 SERPINC1P01008 464 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 CLEC3BP05452 202 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 FESP07332 822 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 ACADMP11310 421 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 CREB1P16220 341 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 ALOX12P18054 663 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 BCKDHBP21953 392 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 PRKCHP24723 683 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 ADRA1DP25100 572 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 GKP32189 559 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 TKTL1P51854 596 aa7.74□□□□□ -1.17
ATG4D-210ENST00000588972 SIM1P81133 766 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms