RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 RILPQ96NA2 401 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 HIST1H2AJQ99878 128 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 H2AFJQ9BTM1 129 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 TRIM54Q9BYV2 358 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 NUF2Q9BZD4 464 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 FOXQ1Q9C009 403 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 ZBTB26Q9HCK0 441 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 TNFRSF12AQ9NP84 129 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 MID1IP1Q9NPA3 183 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 FZD3Q9NPG1 666 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 ARL15Q9NXU5 204 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 THEGQ9P2T0 379 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 EBF1Q9UH73 591 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 PTBP2Q9UKA9 531 aaKnown RBP11.16□□□□□ -0.62
SMAD4-205ENST00000588745 PCYT1BQ9Y5K3 369 aaPredicted RBP11.16□□□□□ -0.62
SMAD4-205ENST00000588745 DOCK9Q9BZ29 2069 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 TRPC5OSA6NMA1 111 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 ARHGEF33A8MVX0 844 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 C10orf142B7Z368 130 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 H3BM21 787 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 CACNB4O00305 520 aaPredicted RBP11.16□□□□□ -0.62
SMAD4-205ENST00000588745 PPP6CO00743 305 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 FCHO1O14526 889 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 AZIN1O14977 448 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 SLC31A1O15431 190 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 POP7O75817 140 aaKnown RBP11.16□□□□□ -0.62
SMAD4-205ENST00000588745 SEMA4FO95754 770 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 CATP04040 527 aaKnown RBP11.16□□□□□ -0.62
SMAD4-205ENST00000588745 PDHA2P29803 388 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 HSPA7P48741 367 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 INHBCP55103 352 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 SH3BP2P78314 561 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 PLOD1Q02809 727 aaPredicted RBP11.16□□□□□ -0.62
SMAD4-205ENST00000588745 RBBP7Q16576 425 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 SPRED3Q2MJR0 410 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 C18orf21Q32NC0 220 aaPredicted RBP11.16□□□□□ -0.62
SMAD4-205ENST00000588745 GALNTL6Q49A17 601 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.16□□□□□ -0.62
SMAD4-205ENST00000588745 TMEM31Q5JXX7 168 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 KANK2Q63ZY3 851 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 FAM91A1Q658Y4 838 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 CLNKQ7Z7G1 428 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 CFAP206Q8IYR0 622 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 CLYBLQ8N0X4 340 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 SIX5Q8N196 739 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 MCOLN3Q8TDD5 553 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 FOPNLQ96NB1 174 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 ZNF382Q96SR6 550 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 MYOCQ99972 504 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 HGH1Q9BTY7 390 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 APOOQ9BUR5 198 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 CD244Q9BZW8 370 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 NMUR2Q9GZQ4 415 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 DPEP2Q9H4A9 486 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 TCF7L2Q9NQB0 619 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 OPTCQ9UBM4 332 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 STK38LQ9Y2H1 464 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 FIS1Q9Y3D6 152 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 TRAF6Q9Y4K3 522 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 DNMT3AQ9Y6K1 912 aaPredicted RBP11.16□□□□□ -0.62
SMAD4-205ENST00000588745 PRUNE2Q8WUY3 3088 aa11.15□□□□□ -0.62
SMAD4-205ENST00000588745 ANKRD12Q6UB98 2062 aa11.15□□□□□ -0.62
SMAD4-205ENST00000588745 ZFC3H1O60293 1989 aaKnown RBP11.15□□□□□ -0.63
SMAD4-205ENST00000588745 KLHL33A6NCF5 533 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 FAM170BA6NMN3 283 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 K7EPI3 171 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 FPGTO14772 594 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 KMOO15229 486 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 CCNT2O60583 730 aaKnown RBP11.15□□□□□ -0.63
SMAD4-205ENST00000588745 CCDC22O60826 627 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 SKAP2O75563 359 aaPredicted RBP11.15□□□□□ -0.63
SMAD4-205ENST00000588745 JUNP05412 331 aaKnown RBP11.15□□□□□ -0.63
SMAD4-205ENST00000588745 SERPINA6P08185 405 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 FGF4P08620 206 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 HNRNPA2B1P22626 353 aaKnown RBP11.15□□□□□ -0.63
SMAD4-205ENST00000588745 MAP4P27816 1152 aaKnown RBP11.15□□□□□ -0.63
SMAD4-205ENST00000588745 BDKRB1P46663 353 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 HNMTP50135 292 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 PKNOX1P55347 436 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 KIAA1024LP59773 190 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 BTKQ06187 659 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 ABRQ12979 859 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 RPA4Q13156 261 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 GTF2H2Q13888 395 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 NFE2L1Q14494 772 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 CLEC6AQ6EIG7 209 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 GTF2H2CQ6P1K8 395 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 TTC23LQ6PF05 361 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 GPRIN3Q6ZVF9 776 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 ACAD11Q709F0 780 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 LRRC70Q7Z2Q7 622 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 GOLGA7Q7Z5G4 137 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 AMZ2Q86W34 360 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 PRR11Q96HE9 360 aaPredicted RBP11.15□□□□□ -0.63
SMAD4-205ENST00000588745 MAELQ96JY0 434 aaKnown RBP11.15□□□□□ -0.63
SMAD4-205ENST00000588745 HHIPQ96QV1 700 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 OR52B2Q96RD2 323 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 NELL2Q99435 816 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 CCDC28BQ9BUN5 200 aa11.15□□□□□ -0.63
SMAD4-205ENST00000588745 RMI1Q9H9A7 625 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms