RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, human

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC130-208	ENST00000588071	YY2	O15391	372 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	ZBTB14	O43829	449 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	GLRA3	O75311	464 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	TSPAN12	O95859	305 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	C8G	P07360	202 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	GSTA1	P08263	222 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	F3	P13726	295 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	SLC2A4	P14672	509 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	CD1D	P15813	335 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	CREB1	P16220	341 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	MAP4	P27816	1152 aa	Known RBP	13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	CRHR1	P34998	444 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	GLRB	P48167	497 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	CCT8	P50990	548 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	SPEM2	Q0P670	501 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	ACAP2	Q15057	778 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	SHB	Q15464	509 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	TTMP	Q5BVD1	217 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	TCEAL6	Q6IPX3	200 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	LVRN	Q6Q4G3	990 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	ABRAXAS1	Q6UWZ7	409 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	XKR5	Q6UX68	686 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	WASH2P	Q6VEQ5	465 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	PDZD3	Q86UT5	571 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	LCA5	Q86VQ0	697 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	CENPL	Q8N0S6	344 aa	Predicted RBP	13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	BANP	Q8N9N5	519 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	ZDHHC1	Q8WTX9	485 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	TFG	Q92734	400 aa	Predicted RBP	13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	TCEAL3	Q969E4	200 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	APOPT1	Q96IL0	206 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	FERD3L	Q96RJ6	166 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	INSM2	Q96T92	566 aa	Predicted RBP	13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	MED4	Q9NPJ6	270 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	WASH6P	Q9NQA3	447 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	ZNF358	Q9NW07	568 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	UCKL1	Q9NWZ5	548 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	GRID1	Q9ULK0	1009 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	ASF1A	Q9Y294	204 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	CSNK1G3	Q9Y6M4	447 aa		13.8	□□□□□ -0.2
CCDC130-208	ENST00000588071	PABPN1L	A6NDY0	278 aa	Known RBP	13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	NPEPPSL1	A6NEC2	478 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	PRR19	A6NJB7	356 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071		B4DGG1	531 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	LMO7DN	F2Z398	122 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	CDC7	O00311	574 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	MATN4	O95460	622 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	TOP3B	O95985	862 aa	Known RBP	13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	RBP1	P09455	135 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	TFEB	P19484	476 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	CYP2A7	P20853	494 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	ACADL	P28330	430 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	EPHA8	P29322	1005 aa	Predicted RBP	13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	CCNF	P41002	786 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	SUZ12	Q15022	739 aa	Known RBP	13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	RPE65	Q16518	533 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	DEFB133	Q30KQ1	61 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	TTC23L	Q6PF05	361 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	IYD	Q6PHW0	289 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	UBE2R2	Q712K3	238 aa	Predicted RBP	13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	CLEC14A	Q86T13	490 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	ISCA2	Q86U28	154 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	GATAD2A	Q86YP4	633 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	SLC25A45	Q8N413	288 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	PHC3	Q8NDX5	983 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	OR2I1P	Q8NGU4	316 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	STAG3L4	Q8TBR4	150 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	MAGEC3	Q8TD91	643 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	MCOLN3	Q8TDD5	553 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	KIAA1191	Q96A73	305 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	CXorf40B	Q96DE9	158 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	RMDN2	Q96LZ7	410 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	TRIM54	Q9BYV2	358 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	TRIT1	Q9H3H1	467 aa	Known RBP	13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	TFB2M	Q9H5Q4	396 aa	Known RBP	13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	ALG9	Q9H6U8	611 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	SSU72	Q9NP77	194 aa	Known RBP	13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	IMP3	Q9NV31	184 aa	Known RBP	13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	TMEM216	Q9P0N5	145 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	SIRPG	Q9P1W8	387 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	PCOLCE2	Q9UKZ9	415 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	HEBP2	Q9Y5Z4	205 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	CFAP20	Q9Y6A4	193 aa	Known RBP	13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	COLEC10	Q9Y6Z7	277 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	CABIN1	Q9Y6J0	2220 aa		13.79	□□□□□ -0.2
CCDC130-208	ENST00000588071	PCM1	Q15154	2024 aa		13.78	□□□□□ -0.2
CCDC130-208	ENST00000588071	SLC16A5	O15375	505 aa		13.78	□□□□□ -0.2
CCDC130-208	ENST00000588071	FFAR2	O15552	330 aa		13.78	□□□□□ -0.2
CCDC130-208	ENST00000588071	EML2	O95834	649 aa		13.78	□□□□□ -0.2
CCDC130-208	ENST00000588071	CAT	P04040	527 aa	Known RBP	13.78	□□□□□ -0.2
CCDC130-208	ENST00000588071	RPN2	P04844	631 aa		13.78	□□□□□ -0.2
CCDC130-208	ENST00000588071	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	13.78	□□□□□ -0.2
CCDC130-208	ENST00000588071	HIST1H2AD	P20671	130 aa		13.78	□□□□□ -0.2
CCDC130-208	ENST00000588071	HPD	P32754	393 aa	Predicted RBP	13.78	□□□□□ -0.2
CCDC130-208	ENST00000588071	BIRC2	Q13490	618 aa		13.78	□□□□□ -0.2
CCDC130-208	ENST00000588071	TSN	Q15631	228 aa	Known RBP	13.78	□□□□□ -0.2
CCDC130-208	ENST00000588071	C16orf46	Q6P387	395 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms