RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 PVRP15151 417 aa13.74□□□□□ -0.21
ERCC1-205ENST00000587888 ITGALP20701 1170 aa13.74□□□□□ -0.21
ERCC1-205ENST00000587888 CTNNA2P26232 953 aa13.74□□□□□ -0.21
ERCC1-205ENST00000587888 PDHA2P29803 388 aa13.74□□□□□ -0.21
ERCC1-205ENST00000587888 RORAP35398 523 aa13.74□□□□□ -0.21
ERCC1-205ENST00000587888 LMAN1P49257 510 aa13.74□□□□□ -0.21
ERCC1-205ENST00000587888 PRLHRP49683 370 aa13.74□□□□□ -0.21
ERCC1-205ENST00000587888 EIF3EP60228 445 aaKnown RBP13.74□□□□□ -0.21
ERCC1-205ENST00000587888 OTUD4Q01804 1114 aaKnown RBP13.74□□□□□ -0.21
ERCC1-205ENST00000587888 MSLNQ13421 630 aaPredicted RBP13.74□□□□□ -0.21
ERCC1-205ENST00000587888 RAPSNQ13702 412 aa13.74□□□□□ -0.21
ERCC1-205ENST00000587888 INPP5JQ15735 1006 aaPredicted RBP13.74□□□□□ -0.21
ERCC1-205ENST00000587888 ZRANB3Q5FWF4 1079 aa13.74□□□□□ -0.21
ERCC1-205ENST00000587888 TAS2R42Q7RTR8 314 aa13.74□□□□□ -0.21
ERCC1-205ENST00000587888 SNX20Q7Z614 316 aa13.74□□□□□ -0.21
ERCC1-205ENST00000587888 NXPE1Q8N323 547 aa13.74□□□□□ -0.21
ERCC1-205ENST00000587888 CCDC110Q8TBZ0 833 aa13.74□□□□□ -0.21
ERCC1-205ENST00000587888 ACTL9Q8TC94 416 aa13.74□□□□□ -0.21
ERCC1-205ENST00000587888 HM13Q8TCT9 377 aa13.74□□□□□ -0.21
ERCC1-205ENST00000587888 TBL1YQ9BQ87 522 aa13.74□□□□□ -0.21
ERCC1-205ENST00000587888 NUDT9Q9BW91 350 aa13.74□□□□□ -0.21
ERCC1-205ENST00000587888 PCMTD2Q9NV79 361 aa13.74□□□□□ -0.21
ERCC1-205ENST00000587888 C17orf113A0A1B0GUU1 675 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 AGAP14A8MT82 685 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 MATN2O00339 956 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 DPM1O60762 260 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 STK10O94804 968 aaKnown RBP13.73□□□□□ -0.21
ERCC1-205ENST00000587888 CAPN1P07384 714 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 RBP3P10745 1247 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 TPH1P17752 444 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 MC4RP32245 332 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 HADHAP40939 763 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 VAV2P52735 878 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 TBX2Q13207 712 aaPredicted RBP13.73□□□□□ -0.21
ERCC1-205ENST00000587888 PRR30Q53SZ7 412 aaPredicted RBP13.73□□□□□ -0.21
ERCC1-205ENST00000587888 PAPD7Q5XG87 772 aaKnown RBP13.73□□□□□ -0.21
ERCC1-205ENST00000587888 DENND5AQ6IQ26 1287 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 JMJD6Q6NYC1 403 aaPredicted RBP13.73□□□□□ -0.21
ERCC1-205ENST00000587888 ZNF449Q6P9G9 518 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 AMIGO1Q86WK6 493 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 LURAP1LQ8IV03 231 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 CDKL3Q8IVW4 592 aaPredicted RBP13.73□□□□□ -0.21
ERCC1-205ENST00000587888 SYTL1Q8IYJ3 562 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 ZBTB2Q8N680 514 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 OR52E1Q8NGJ3 308 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 HEXDCQ8WVB3 486 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 TRAPPC9Q96Q05 1148 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 OR52A5Q9H2C5 316 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 COG4Q9H9E3 785 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 SLAMF7Q9NQ25 335 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 ZDHHC3Q9NYG2 299 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 PLEKHB1Q9UF11 243 aaPredicted RBP13.73□□□□□ -0.21
ERCC1-205ENST00000587888 G3BP2Q9UN86 482 aaKnown RBP13.73□□□□□ -0.21
ERCC1-205ENST00000587888 MAST4O15021 2626 aa13.73□□□□□ -0.21
ERCC1-205ENST00000587888 NAV2Q8IVL1 2488 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 C2orf74A8MZ97 194 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 E7EQ34 232 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 ZNF749O43361 778 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 SEMA7AO75326 666 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 CEACAM4O75871 244 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 SORBS2O94875 1100 aaKnown RBP13.72□□□□□ -0.21
ERCC1-205ENST00000587888 PRSS56P0CW18 603 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 AGXTP21549 392 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 ZNF140P52738 457 aaPredicted RBP13.72□□□□□ -0.21
ERCC1-205ENST00000587888 NAP1L1P55209 391 aaKnown RBP13.72□□□□□ -0.21
ERCC1-205ENST00000587888 COPS2P61201 443 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 ATP1A4Q13733 1029 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 BRD3Q15059 726 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 SPA17Q15506 151 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 EIF2S3LQ2VIR3 472 aaKnown RBP13.72□□□□□ -0.21
ERCC1-205ENST00000587888 ZNF789Q5FWF6 425 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 C11orf63Q6NUN7 778 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 FAM198BQ6UWH4 519 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 CDHR3Q6ZTQ4 885 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 MED25Q71SY5 747 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 HOOK3Q86VS8 718 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 SERPINA9Q86WD7 417 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 CLDN19Q8N6F1 224 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 TFGQ92734 400 aaPredicted RBP13.72□□□□□ -0.21
ERCC1-205ENST00000587888 N4BP2L2Q92802 583 aaPredicted RBP13.72□□□□□ -0.21
ERCC1-205ENST00000587888 DNAJC1Q96KC8 554 aaKnown RBP13.72□□□□□ -0.21
ERCC1-205ENST00000587888 HGH1Q9BTY7 390 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 TSPY26PQ9H489 355 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 TFB2MQ9H5Q4 396 aaKnown RBP13.72□□□□□ -0.21
ERCC1-205ENST00000587888 MVB12BQ9H7P6 319 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 SYTL2Q9HCH5 934 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 ACTR10Q9NZ32 417 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 PCDHGB7Q9Y5F8 929 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 PTPN13Q12923 2485 aa13.72□□□□□ -0.21
ERCC1-205ENST00000587888 MED13Q9UHV7 2174 aa13.71□□□□□ -0.21
ERCC1-205ENST00000587888 TCP11X1B4DZS4 312 aa13.71□□□□□ -0.21
ERCC1-205ENST00000587888 LDB2O43679 373 aa13.71□□□□□ -0.21
ERCC1-205ENST00000587888 ACRV1P26436 265 aa13.71□□□□□ -0.21
ERCC1-205ENST00000587888 OTX2P32243 289 aa13.71□□□□□ -0.21
ERCC1-205ENST00000587888 CD151P48509 253 aa13.71□□□□□ -0.21
ERCC1-205ENST00000587888 RRADP55042 308 aa13.71□□□□□ -0.21
ERCC1-205ENST00000587888 MRPL49Q13405 166 aaKnown RBP13.71□□□□□ -0.21
ERCC1-205ENST00000587888 KYNUQ16719 465 aa13.71□□□□□ -0.21
ERCC1-205ENST00000587888 GPR33Q49SQ1 333 aa13.71□□□□□ -0.21
ERCC1-205ENST00000587888 MLIPQ5VWP3 458 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms