RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 KIRREL3Q8IZU9 778 aa10.12□□□□□ -0.79
CLPTM1-207ENST00000587537 C4orf33Q8N1A6 199 aa10.12□□□□□ -0.79
CLPTM1-207ENST00000587537 ACVR1CQ8NER5 493 aa10.12□□□□□ -0.79
CLPTM1-207ENST00000587537 OR6C4Q8NGE1 309 aa10.12□□□□□ -0.79
CLPTM1-207ENST00000587537 RAB3IL1Q8TBN0 382 aa10.12□□□□□ -0.79
CLPTM1-207ENST00000587537 LKAAEAR1Q8TD35 194 aa10.12□□□□□ -0.79
CLPTM1-207ENST00000587537 SKA2Q8WVK7 121 aaPredicted RBP10.12□□□□□ -0.79
CLPTM1-207ENST00000587537 CCDC97Q96F63 343 aaPredicted RBP10.12□□□□□ -0.79
CLPTM1-207ENST00000587537 SLC12A9Q9BXP2 914 aa10.12□□□□□ -0.79
CLPTM1-207ENST00000587537 TRIT1Q9H3H1 467 aaKnown RBP10.12□□□□□ -0.79
CLPTM1-207ENST00000587537 OSGEPL1Q9H4B0 414 aa10.12□□□□□ -0.79
CLPTM1-207ENST00000587537 PARVBQ9HBI1 364 aa10.12□□□□□ -0.79
CLPTM1-207ENST00000587537 KCNK9Q9NPC2 374 aa10.12□□□□□ -0.79
CLPTM1-207ENST00000587537 IGSF5Q9NSI5 407 aa10.12□□□□□ -0.79
CLPTM1-207ENST00000587537 EVA1BQ9NVM1 165 aa10.12□□□□□ -0.79
CLPTM1-207ENST00000587537 NUDT4Q9NZJ9 180 aa10.12□□□□□ -0.79
CLPTM1-207ENST00000587537 GULP1Q9UBP9 304 aa10.12□□□□□ -0.79
CLPTM1-207ENST00000587537 DOLKQ9UPQ8 538 aa10.12□□□□□ -0.79
CLPTM1-207ENST00000587537 OARD1Q9Y530 152 aa10.12□□□□□ -0.79
CLPTM1-207ENST00000587537 TMEM120BA0PK00 339 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 PDZK1P1A8MUH7 402 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 GOLGA8RI6L899 631 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 ARHGAP33O14559 1287 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 KHNYNO15037 678 aaKnown RBP10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 ZW10O43264 779 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 AQP9O43315 295 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 PLIN3O60664 434 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 PIAS2O75928 621 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 FUCA1P04066 466 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 CFIP05156 583 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 ANXA6P08133 673 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 ACADLP28330 430 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 NBL1P41271 181 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 CCT8P50990 548 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 NFKB2Q00653 900 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 ZNF460Q14592 562 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 KIF19Q2TAC6 998 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 TRIM61Q5EBN2 209 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 TECRLQ5HYJ1 363 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 PPM1JQ5JR12 505 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 TPRG1LQ5T0D9 272 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 N4BP2L1Q5TBK1 243 aaPredicted RBP10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 KCTD16Q68DU8 428 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 TMEM207Q6UWW9 146 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 CYHR1Q6ZMK1 362 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 MICALCLQ6ZW33 695 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 UBE2R2Q712K3 238 aaPredicted RBP10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 RAB44Q7Z6P3 723 aaPredicted RBP10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 TAF8Q7Z7C8 310 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 ISCA2Q86U28 154 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 GPSM1Q86YR5 675 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 RASGRP3Q8IV61 690 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 PNPLA1Q8N8W4 532 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 ZNF548Q8NEK5 533 aaPredicted RBP10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 OR5K2Q8NHB8 316 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 FAM76AQ8TAV0 307 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 TCP10LQ8TDR4 215 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 KCTD4Q8WVF5 259 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 ANKRD49Q8WVL7 239 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 TFGQ92734 400 aaPredicted RBP10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 RAD51AP1Q96B01 352 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 SH3KBP1Q96B97 665 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 NXNL1Q96CM4 212 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 SCYL1Q96KG9 808 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 CCDC138Q96M89 665 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 GPR78Q96P69 363 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 SLC30A3Q99726 388 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 LRRC61Q9BV99 259 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 TMEM168Q9H0V1 697 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 MRPL40Q9NQ50 206 aaKnown RBP10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 TMEM74BQ9NUR3 256 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 POT1Q9NUX5 634 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 SLC23A2Q9UGH3 650 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 RNF112Q9ULX5 631 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 DNAJC16Q9Y2G8 782 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 PCDHGB2Q9Y5G2 931 aa10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 TNPO3Q9Y5L0 923 aaKnown RBP10.11□□□□□ -0.79
CLPTM1-207ENST00000587537 A0A1B0GTQ1 180 aa10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 FAM221BA6H8Z2 402 aa10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 H3BQF6 201 aa10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 STX16-NPEPL1H3BU86 382 aa10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 STX16O14662 325 aa10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 SCAMP1O15126 338 aa10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 PCDHGA12O60330 932 aa10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 SNX2O60749 519 aa10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 PROCP04070 461 aa10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 F7P08709 466 aaPredicted RBP10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 ANXA5P08758 320 aa10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 MYL2P10916 166 aa10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 XRCC1P18887 633 aaPredicted RBP10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 CCND1P24385 295 aa10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 ATP5F1P24539 256 aaPredicted RBP10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 HPDP32754 393 aaPredicted RBP10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 SERPINB5P36952 375 aa10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 PIK3CGP48736 1102 aa10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 RPIAP49247 311 aa10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 ATXN3P54252 364 aaPredicted RBP10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 ALDH18A1P54886 795 aaKnown RBP10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 IL9RQ01113 521 aa10.1□□□□□ -0.79
CLPTM1-207ENST00000587537 GRIK2Q13002 908 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms