RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 LIMK2P53671 638 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 CDKN2DP55273 166 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 GPLD1P80108 840 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 KRT33BQ14525 404 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 CLPPQ16740 277 aaPredicted RBP18.7■□□□□ 0.58
DDX39A-204ENST00000586558 KLHL38Q2WGJ6 581 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 CCDC157Q569K6 752 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 HECTD2Q5U5R9 776 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 LRRC8EQ6NSJ5 796 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 UNC5DQ6UXZ4 953 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 TMEM26Q6ZUK4 368 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 NEK10Q6ZWH5 1172 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 VRK3Q8IV63 474 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 SIDT2Q8NBJ9 832 aaKnown RBP18.7■□□□□ 0.58
DDX39A-204ENST00000586558 GIMAP7Q8NHV1 300 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 ATXN7L3BQ96GX2 97 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 ELMO2Q96JJ3 720 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 SLC38A3Q99624 504 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 ABCG4Q9H172 646 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 KIR3DX1Q9H7L2 352 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 GALPQ9UBC7 116 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 CFAP20Q9Y6A4 193 aaKnown RBP18.7■□□□□ 0.58
DDX39A-204ENST00000586558 RGS4P49798 205 aa18.69■□□□□ 0.58
DDX39A-204ENST00000586558 POU4F1Q01851 419 aa18.69■□□□□ 0.58
DDX39A-204ENST00000586558 PDAP1Q13442 181 aaKnown RBP18.69■□□□□ 0.58
DDX39A-204ENST00000586558 GPR18Q14330 331 aa18.69■□□□□ 0.58
DDX39A-204ENST00000586558 UBAP2Q5T6F2 1119 aaKnown RBP18.69■□□□□ 0.58
DDX39A-204ENST00000586558 EMBQ6PCB8 327 aa18.69■□□□□ 0.58
DDX39A-204ENST00000586558 DGLUCYQ7Z3D6 616 aa18.69■□□□□ 0.58
DDX39A-204ENST00000586558 TBC1D21Q8IYX1 336 aa18.69■□□□□ 0.58
DDX39A-204ENST00000586558 ADAMTS14Q8WXS8 1223 aa18.69■□□□□ 0.58
DDX39A-204ENST00000586558 TSPAN17Q96FV3 270 aa18.69■□□□□ 0.58
DDX39A-204ENST00000586558 GPR22Q99680 433 aa18.69■□□□□ 0.58
DDX39A-204ENST00000586558 TRIT1Q9H3H1 467 aaKnown RBP18.69■□□□□ 0.58
DDX39A-204ENST00000586558 POPDC3Q9HBV1 291 aa18.69■□□□□ 0.58
DDX39A-204ENST00000586558 KCNK4Q9NYG8 393 aa18.69■□□□□ 0.58
DDX39A-204ENST00000586558 ASF1AQ9Y294 204 aa18.69■□□□□ 0.58
DDX39A-204ENST00000586558 KDM1AO60341 852 aa18.68■□□□□ 0.58
DDX39A-204ENST00000586558 TCEA3O75764 348 aa18.68■□□□□ 0.58
DDX39A-204ENST00000586558 ALDH4A1P30038 563 aa18.68■□□□□ 0.58
DDX39A-204ENST00000586558 TIAL1Q01085 375 aaKnown RBP eCLIP18.68■□□□□ 0.58
DDX39A-204ENST00000586558 SQSTM1Q13501 440 aa18.68■□□□□ 0.58
DDX39A-204ENST00000586558 EFTUD2Q15029 972 aaKnown RBP eCLIP18.68■□□□□ 0.586e-7■■■■□ 25.2
DDX39A-204ENST00000586558 ACSBG2Q5FVE4 666 aa18.68■□□□□ 0.58
DDX39A-204ENST00000586558 DUS1LQ6P1R4 473 aaKnown RBP18.68■□□□□ 0.58
DDX39A-204ENST00000586558 CNPY4Q8N129 248 aa18.68■□□□□ 0.58
DDX39A-204ENST00000586558 Q8N9G6 341 aaPredicted RBP18.68■□□□□ 0.58
DDX39A-204ENST00000586558 ACVR1CQ8NER5 493 aa18.68■□□□□ 0.58
DDX39A-204ENST00000586558 OR10G6Q8NH81 332 aa18.68■□□□□ 0.58
DDX39A-204ENST00000586558 OR5K2Q8NHB8 316 aa18.68■□□□□ 0.58
DDX39A-204ENST00000586558 SKA2Q8WVK7 121 aaPredicted RBP18.68■□□□□ 0.58
DDX39A-204ENST00000586558 FOPNLQ96NB1 174 aa18.68■□□□□ 0.58
DDX39A-204ENST00000586558 FERD3LQ96RJ6 166 aa18.68■□□□□ 0.58
DDX39A-204ENST00000586558 SLC30A3Q99726 388 aa18.68■□□□□ 0.58
DDX39A-204ENST00000586558 PARD6BQ9BYG5 372 aa18.68■□□□□ 0.58
DDX39A-204ENST00000586558 POLG2Q9UHN1 485 aa18.68■□□□□ 0.58
DDX39A-204ENST00000586558 RAB21Q9UL25 225 aa18.68■□□□□ 0.58
DDX39A-204ENST00000586558 IKBKGQ9Y6K9 419 aa18.68■□□□□ 0.58
DDX39A-204ENST00000586558 IGHV1OR21-1A0A087WYE8 117 aa18.67■□□□□ 0.58
DDX39A-204ENST00000586558 NTN3O00634 580 aaPredicted RBP18.67■□□□□ 0.58
DDX39A-204ENST00000586558 B4GAT1O43505 415 aa18.67■□□□□ 0.58
DDX39A-204ENST00000586558 DUX1O43812 170 aa18.67■□□□□ 0.58
DDX39A-204ENST00000586558 RPLP0P05388 317 aaKnown RBP18.67■□□□□ 0.58
DDX39A-204ENST00000586558 INHBAP08476 426 aa18.67■□□□□ 0.58
DDX39A-204ENST00000586558 MPC1LP0DKB6 136 aa18.67■□□□□ 0.58
DDX39A-204ENST00000586558 CCNFP41002 786 aa18.67■□□□□ 0.58
DDX39A-204ENST00000586558 SLC12A2P55011 1212 aa18.67■□□□□ 0.58
DDX39A-204ENST00000586558 OR1D5P58170 312 aa18.67■□□□□ 0.58
DDX39A-204ENST00000586558 KLHL35Q6PF15 583 aa18.67■□□□□ 0.58
DDX39A-204ENST00000586558 DHRS13Q6UX07 377 aa18.67■□□□□ 0.58
DDX39A-204ENST00000586558 TAOK1Q7L7X3 1001 aa18.67■□□□□ 0.58
DDX39A-204ENST00000586558 PIM3Q86V86 326 aa18.67■□□□□ 0.58
DDX39A-204ENST00000586558 AENQ8WTP8 325 aaKnown RBP18.67■□□□□ 0.58
DDX39A-204ENST00000586558 SLC44A1Q8WWI5 657 aa18.67■□□□□ 0.58
DDX39A-204ENST00000586558 GFM1Q96RP9 751 aaKnown RBP18.67■□□□□ 0.58
DDX39A-204ENST00000586558 OLFM1Q99784 485 aa18.67■□□□□ 0.58
DDX39A-204ENST00000586558 DPYSL5Q9BPU6 564 aa18.67■□□□□ 0.58
DDX39A-204ENST00000586558 LRRN3Q9H3W5 708 aa18.67■□□□□ 0.58
DDX39A-204ENST00000586558 RRAGDQ9NQL2 400 aaPredicted RBP18.67■□□□□ 0.58
DDX39A-204ENST00000586558 SLC24A2Q9UI40 661 aa18.67■□□□□ 0.58
DDX39A-204ENST00000586558 MTO1Q9Y2Z2 717 aaKnown RBP18.67■□□□□ 0.58
DDX39A-204ENST00000586558 EXOC1LA0A1B0GW35 172 aa18.66■□□□□ 0.58
DDX39A-204ENST00000586558 MATN4O95460 622 aa18.66■□□□□ 0.58
DDX39A-204ENST00000586558 ITGA2BP08514 1039 aa18.66■□□□□ 0.58
DDX39A-204ENST00000586558 SERPINB9P50453 376 aa18.66■□□□□ 0.58
DDX39A-204ENST00000586558 TAS2R39P59534 338 aa18.66■□□□□ 0.58
DDX39A-204ENST00000586558 IL2P60568 153 aa18.66■□□□□ 0.58
DDX39A-204ENST00000586558 CCL7P80098 99 aa18.66■□□□□ 0.58
DDX39A-204ENST00000586558 INSM1Q01101 510 aaPredicted RBP18.66■□□□□ 0.58
DDX39A-204ENST00000586558 ABRQ12979 859 aa18.66■□□□□ 0.58
DDX39A-204ENST00000586558 SPIDRQ14159 915 aa18.66■□□□□ 0.58
DDX39A-204ENST00000586558 SLC29A2Q14542 456 aa18.66■□□□□ 0.58
DDX39A-204ENST00000586558 USP10Q14694 798 aaKnown RBP18.66■□□□□ 0.58
DDX39A-204ENST00000586558 PLCL1Q15111 1095 aa18.66■□□□□ 0.58
DDX39A-204ENST00000586558 TTC23LQ6PF05 361 aa18.66■□□□□ 0.58
DDX39A-204ENST00000586558 PAQR3Q6TCH7 311 aa18.66■□□□□ 0.58
DDX39A-204ENST00000586558 ZNF761Q86XN6 746 aaPredicted RBP18.66■□□□□ 0.58
DDX39A-204ENST00000586558 DCUN1D3Q8IWE4 304 aa18.66■□□□□ 0.58
DDX39A-204ENST00000586558 CPNE9Q8IYJ1 553 aa18.66■□□□□ 0.58
DDX39A-204ENST00000586558 PHC3Q8NDX5 983 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms