RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 SRP72O76094 671 aaKnown RBP11.51□□□□□ -0.57
BRCA1-225ENST00000586385 VARSP26640 1264 aaKnown RBP11.51□□□□□ -0.57
BRCA1-225ENST00000586385 NDUFS1P28331 727 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 PDHA2P29803 388 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 OTX2P32243 289 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 ADRA1AP35348 466 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 NR2C2P49116 596 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 PRLHRP49683 370 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 RRADP55042 308 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 ZRANB3Q5FWF4 1079 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 DCAF10Q5QP82 559 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 PPP1R32Q7Z5V6 425 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 CUZD1Q86UP6 607 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 TRIM73Q86UV7 250 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 ZC3H18Q86VM9 953 aaKnown RBP11.51□□□□□ -0.57
BRCA1-225ENST00000586385 IQCKQ8N0W5 287 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 PHC3Q8NDX5 983 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 FLVCR1-AS1Q8TAF5 88 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 HM13Q8TCT9 377 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 LCN9Q8WX39 176 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 GBP5Q96PP8 586 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 SRMSQ9H3Y6 488 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 XKR8Q9H6D3 395 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 ASB8Q9H765 288 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 FANCEQ9HB96 536 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 KLHL8Q9P2G9 620 aaPredicted RBP11.51□□□□□ -0.57
BRCA1-225ENST00000586385 SLC5A6Q9Y289 635 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 PKP3Q9Y446 797 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 PCDHGA10Q9Y5H3 936 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 FER1L5A0AVI2 2057 aa11.51□□□□□ -0.57
BRCA1-225ENST00000586385 ANKUB1A6NFN9 424 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 E7EQ34 232 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 CCL22O00626 93 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 E2F3O00716 465 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 UMODP07911 640 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 TPBGLP0DKB5 382 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 TNNT1P13805 278 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 PRF1P14222 555 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 COMTP21964 271 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 ARHGAP25P42331 645 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 CDKN1CP49918 316 aaPredicted RBP11.5□□□□□ -0.57
BRCA1-225ENST00000586385 PRKAA1Q13131 559 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 MPP3Q13368 585 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 MYBPC3Q14896 1274 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 TAF1AQ15573 450 aaPredicted RBP11.5□□□□□ -0.57
BRCA1-225ENST00000586385 KYNUQ16719 465 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 KAZNQ674X7 775 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 CAVIN1Q6NZI2 390 aaKnown RBP11.5□□□□□ -0.57
BRCA1-225ENST00000586385 RANBP10Q6VN20 620 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 Q6ZS92 163 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 PID1Q7Z2X4 250 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 RAB43Q86YS6 212 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 GALNT16Q8N428 558 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 OR52E1Q8NGJ3 308 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 OR13C4Q8NGS5 318 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 HAUS1Q96CS2 278 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 IQCDQ96DY2 449 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 SGSM3Q96HU1 749 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 QKIQ96PU8 341 aaKnown RBP eCLIP11.5□□□□□ -0.57
BRCA1-225ENST00000586385 DNAJC7Q99615 494 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 CHP1Q99653 195 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 DPH2Q9BQC3 489 aaPredicted RBP11.5□□□□□ -0.57
BRCA1-225ENST00000586385 APOL2Q9BQE5 337 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 FICDQ9BVA6 458 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 SPRTNQ9H040 489 aaPredicted RBP11.5□□□□□ -0.57
BRCA1-225ENST00000586385 TFB2MQ9H5Q4 396 aaKnown RBP11.5□□□□□ -0.57
BRCA1-225ENST00000586385 FAM96AQ9H5X1 160 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 COG4Q9H9E3 785 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 SYTL2Q9HCH5 934 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 SLC22A11Q9NSA0 550 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 SPTLC3Q9NUV7 552 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 P4HTMQ9NXG6 502 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 ACTR10Q9NZ32 417 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 IFNKQ9P0W0 207 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 ICKQ9UPZ9 632 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 CDYLQ9Y232 598 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 COLEC10Q9Y6Z7 277 aa11.5□□□□□ -0.57
BRCA1-225ENST00000586385 PIKFYVEQ9Y2I7 2098 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 IGLV3-16A0A075B6K0 115 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 CCDC66A2RUB6 948 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 KLHL33A6NCF5 533 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 C9J4A7 227 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 MATN2O00339 956 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 LDB2O43679 373 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 PRSS56P0CW18 603 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 ITGAXP20702 1163 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 TNFRSF8P28908 595 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 HADHAP40939 763 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 MARCKSL1P49006 195 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 ZNF140P52738 457 aaPredicted RBP11.49□□□□□ -0.57
BRCA1-225ENST00000586385 SOX8P57073 446 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 BOP1Q14137 746 aaKnown RBP11.49□□□□□ -0.57
BRCA1-225ENST00000586385 GSE1Q14687 1217 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 SSPNQ14714 243 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 DEFB110Q30KQ9 67 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 C1orf189Q5VU69 101 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 DENND5AQ6IQ26 1287 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 RHBDD2Q6NTF9 364 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 NXPE1Q8N323 547 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 C5orf34Q96MH7 638 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms