RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 ABRAXAS1Q6UWZ7 409 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 UNC5DQ6UXZ4 953 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 RD3Q7Z3Z2 195 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 RABEPKQ7Z6M1 372 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 MGARPQ8TDB4 240 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 LOXL4Q96JB6 756 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 GSDMCQ9BYG8 508 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 ZDHHC5Q9C0B5 715 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 TCEAL2Q9H3H9 227 aaPredicted RBP15.77■□□□□ 0.12
SS18-226ENST00000585241 NUDT4Q9NZJ9 180 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 SIRPGQ9P1W8 387 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 CPSF2Q9P2I0 782 aaKnown RBP15.77■□□□□ 0.12
SS18-226ENST00000585241 TMCO1Q9UM00 188 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 SDK1Q7Z5N4 2213 aa15.77■□□□□ 0.12
SS18-226ENST00000585241 CACNA1HO95180 2353 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 DLX3O60479 287 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 SLC35G4P0C7Q5 338 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 MYL2P10916 166 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 JUNDP17535 347 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 ATP5F1P24539 256 aaPredicted RBP15.76■□□□□ 0.11
SS18-226ENST00000585241 MDH1P40925 334 aaKnown RBP15.76■□□□□ 0.11
SS18-226ENST00000585241 IRX4P78413 519 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 IL9RQ01113 521 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 BNC1Q01954 994 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 TGFBIQ15582 683 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 PHKG1Q16816 387 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 UAP1L1Q3KQV9 507 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 GPSM1Q86YR5 675 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 CCDC63Q8NA47 563 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 PDPRQ8NCN5 879 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 CCL4L1Q8NHW4 92 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 CCDC126Q96EE4 140 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 FOPNLQ96NB1 174 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 LRRC61Q9BV99 259 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 WWP1Q9H0M0 922 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 PARVBQ9HBI1 364 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 MLXIPLQ9NP71 852 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 OXSMQ9NWU1 459 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 APOBEC3BQ9UH17 382 aaKnown RBP15.76■□□□□ 0.11
SS18-226ENST00000585241 RNF112Q9ULX5 631 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 PDE10AQ9Y233 779 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 WDR37Q9Y2I8 494 aa15.76■□□□□ 0.11
SS18-226ENST00000585241 TP53BP1Q12888 1972 aaPredicted RBP15.76■□□□□ 0.11
SS18-226ENST00000585241 A0A1B0GVT2 93 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 A8MT66 165 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 ARHGEF33A8MVX0 844 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 UBXN8O00124 270 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 EPN2O95208 641 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 CATP04040 527 aaKnown RBP15.75■□□□□ 0.11
SS18-226ENST00000585241 TPBGLP0DKB5 382 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 TAC1P20366 129 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 CYP2A7P20853 494 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 AK4P27144 223 aaPredicted RBP15.75■□□□□ 0.11
SS18-226ENST00000585241 ALDH3A1P30838 453 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 ACTR1BP42025 376 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 RXRGP48443 463 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 PRKAA2P54646 552 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 AP1S2P56377 157 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 DNAJB13P59910 316 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 ACTR1AP61163 376 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 ABRQ12979 859 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 PDK4Q16654 411 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 DUOXA1Q1HG43 343 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 KIF19Q2TAC6 998 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 ZNF542PQ5EBM4 170 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.75■□□□□ 0.11
SS18-226ENST00000585241 UBE2R2Q712K3 238 aaPredicted RBP15.75■□□□□ 0.11
SS18-226ENST00000585241 SDR16C5Q8N3Y7 309 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 SPDYE1Q8NFV5 336 aaPredicted RBP15.75■□□□□ 0.11
SS18-226ENST00000585241 OR6Y1Q8NGX8 325 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 CEP76Q8TAP6 659 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 RAB3IL1Q8TBN0 382 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 CKAP2Q8WWK9 683 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 PIGKQ92643 395 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 OSGEPL1Q9H4B0 414 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 CCDC134Q9H6E4 229 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 DNAJC28Q9NX36 388 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 TBC1D29Q9UFV1 150 aa15.75■□□□□ 0.11
SS18-226ENST00000585241 TSR3Q9UJK0 312 aaKnown RBP15.75■□□□□ 0.11
SS18-226ENST00000585241 NEMP2A6NFY4 417 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 STX16-NPEPL1H3BU86 382 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 IFRD1O00458 451 aaPredicted RBP15.74■□□□□ 0.11
SS18-226ENST00000585241 STX16O14662 325 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 SCAMP1O15126 338 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 POLR3GO15318 223 aaPredicted RBP15.74■□□□□ 0.11
SS18-226ENST00000585241 FFAR2O15552 330 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 SMIM24O75264 130 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 IPO13O94829 963 aaKnown RBP15.74■□□□□ 0.11
SS18-226ENST00000585241 C1orf105O95561 183 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 KCNA4P22459 653 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 HNRNPKP61978 463 aaKnown RBP eCLIP15.74■□□□□ 0.11
SS18-226ENST00000585241 ZC3H14Q6PJT7 736 aaKnown RBP15.74■□□□□ 0.11
SS18-226ENST00000585241 RGS9BPQ6ZS82 235 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 FRA10AC1Q70Z53 315 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 SLC22A9Q8IVM8 553 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 C10orf107Q8IVU9 208 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 DCUN1D3Q8IWE4 304 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 MCOLN3Q8TDD5 553 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 SKA2Q8WVK7 121 aaPredicted RBP15.74■□□□□ 0.11
SS18-226ENST00000585241 TFGQ92734 400 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms