RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	INTS8	Q75QN2	995 aa	Known RBP	3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	HAUS6	Q7Z4H7	955 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	FJX1	Q86VR8	437 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	DCP1B	Q8IZD4	617 aa	Known RBP	3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	GCSAM	Q8N6F7	178 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	RDM1	Q8NG50	284 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	HM13	Q8TCT9	377 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	APBB2	Q92870	758 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	ORAI1	Q96D31	301 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	TMCO6	Q96DC7	493 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	DGAT2	Q96PD7	388 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	EGFL8	Q99944	293 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	CCDC106	Q9BWC9	280 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	KCNK15	Q9H427	330 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	DNAJC18	Q9H819	358 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	MMP25	Q9NPA2	562 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	CCDC177	Q9NQR7	707 aa	Predicted RBP	3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	GDE1	Q9NZC3	331 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	OSGIN1	Q9UJX0	560 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	AMDHD2	Q9Y303	409 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	CCL27	Q9Y4X3	112 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	NFS1	Q9Y697	457 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	EVC2	Q86UK5	1308 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	ZNF541	Q9H0D2	1346 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PALLD	Q8WX93	1383 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	RAB3GAP2	Q9H2M9	1393 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	C4A	P0C0L4	1744 aa		3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	VIRMA	Q69YN4	1812 aa	Known RBP	3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	SPTBN5	Q9NRC6	3674 aa	Known RBP	3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	DICER1	Q9UPY3	1922 aa	Known RBP	3.58	□□□□□ -1.84
PPP4R1-229	ENST00000584754	LOC102723996	A0A087X1L8	192 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	TRBC2	A0A5B9	178 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	TMEM8B	A6NDV4	472 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	IFITM10	A6NMD0	228 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754		A8MXE2	369 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754		H3BQ06	376 aa	Predicted RBP	3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	UBE2C	O00762	179 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	TIMM23	O14925	209 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	WDR46	O15213	610 aa	Known RBP	3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	ADAM20	O43506	726 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PLRG1	O43660	514 aa	Known RBP	3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	GJB3	O75712	270 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	GGPS1	O95749	300 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	AFP	P02771	609 aa	Known RBP	3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	ICAM1	P05362	532 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	CYC1	P08574	325 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PRLR	P16471	622 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	ZNF23	P17027	643 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	USP8	P40818	1118 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	TERF1	P54274	439 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	RAD23A	P54725	363 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	CSE1L	P55060	971 aa	Known RBP	3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	TAS2R38	P59533	333 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	TMF1	P82094	1093 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	POU3F1	Q03052	451 aa	Predicted RBP	3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	ALCAM	Q13740	583 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	MEP1A	Q16819	746 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	CBWD6	Q4V339	395 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	CBWD3	Q5JTY5	395 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	ADAL	Q6DHV7	355 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	LCN10	Q6JVE6	187 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	RPUSD3	Q6P087	351 aa	Known RBP	3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PLEKHM3	Q6ZWE6	761 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	CREB3L2	Q70SY1	520 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	ANKRD23	Q86SG2	305 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PCDH20	Q8N6Y1	951 aa	Known RBP	3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	SLC38A9	Q8NBW4	561 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	NEXN-AS1	Q8NBZ9	246 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	OR10S1	Q8NGN2	331 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	EXD1	Q8NHP7	514 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	LPGAT1	Q92604	370 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PTER	Q96BW5	349 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	HDAC11	Q96DB2	347 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	RMDN1	Q96DB5	314 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	RTP4	Q96DX8	246 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PGAP3	Q96FM1	320 aa	Predicted RBP	3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	RADIL	Q96JH8	1075 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PPP1R13B	Q96KQ4	1090 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	EGLN2	Q96KS0	407 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	ZNF385A	Q96PM9	386 aa	Known RBP	3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	GAD1	Q99259	594 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PAFAH2	Q99487	392 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	SEMA3C	Q99985	751 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	SRSF8	Q9BRL6	282 aa	Known RBP	3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	NSD3	Q9BZ95	1437 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	KLHL4	Q9C0H6	718 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	TRIOBP	Q9H2D6	2365 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PIGM	Q9H3S5	423 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	RAD21L1	Q9H4I0	556 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	FKRP	Q9H9S5	495 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	TSPYL4	Q9UJ04	414 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PLAGL1	Q9UM63	463 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	WBP11	Q9Y2W2	641 aa	Known RBP	3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	GRIP1	Q9Y3R0	1128 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	TRPV2	Q9Y5S1	764 aa		3.57	□□□□□ -1.84
PPP4R1-229	ENST00000584754	CASP8AP2	Q9UKL3	1982 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	TIAM2	Q8IVF5	1701 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	KDM6A	O15550	1401 aa	Predicted RBP	3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	MAP3K19	Q56UN5	1328 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	DVL1	O14640	695 aa		3.56	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms