RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 SCML4Q8N228 414 aa11.09□□□□□ -0.63
TOP3A-217ENST00000584582 ATG16L2Q8NAA4 619 aa11.09□□□□□ -0.63
TOP3A-217ENST00000584582 SNRNP27Q8WVK2 155 aaKnown RBP11.09□□□□□ -0.63
TOP3A-217ENST00000584582 ACDQ96AP0 544 aa11.09□□□□□ -0.63
TOP3A-217ENST00000584582 PPP3R2Q96LZ3 170 aa11.09□□□□□ -0.63
TOP3A-217ENST00000584582 PLEKHG4BQ96PX9 1271 aa11.09□□□□□ -0.63
TOP3A-217ENST00000584582 RANBP9Q96S59 729 aa11.09□□□□□ -0.63
TOP3A-217ENST00000584582 HOPXQ9BPY8 73 aaPredicted RBP11.09□□□□□ -0.63
TOP3A-217ENST00000584582 BDH2Q9BUT1 245 aa11.09□□□□□ -0.63
TOP3A-217ENST00000584582 ASPSCR1Q9BZE9 553 aa11.09□□□□□ -0.63
TOP3A-217ENST00000584582 RIBC2Q9H4K1 309 aa11.09□□□□□ -0.63
TOP3A-217ENST00000584582 NANOGQ9H9S0 305 aa11.09□□□□□ -0.63
TOP3A-217ENST00000584582 TDP1Q9NUW8 608 aa11.09□□□□□ -0.63
TOP3A-217ENST00000584582 COMMD8Q9NX08 183 aa11.09□□□□□ -0.63
TOP3A-217ENST00000584582 FNIP2Q9P278 1114 aa11.09□□□□□ -0.63
TOP3A-217ENST00000584582 DEAF1O75398 565 aaPredicted RBP11.08□□□□□ -0.63
TOP3A-217ENST00000584582 LEFTY1O75610 366 aa11.08□□□□□ -0.63
TOP3A-217ENST00000584582 HLA-FP30511 346 aa11.08□□□□□ -0.63
TOP3A-217ENST00000584582 PPM1AP35813 382 aa11.08□□□□□ -0.63
TOP3A-217ENST00000584582 HK3P52790 923 aa11.08□□□□□ -0.63
TOP3A-217ENST00000584582 SIM2Q14190 667 aaPredicted RBP11.08□□□□□ -0.63
TOP3A-217ENST00000584582 C22orf39Q6P5X5 142 aa11.08□□□□□ -0.63
TOP3A-217ENST00000584582 SUSD1Q6UWL2 747 aa11.08□□□□□ -0.63
TOP3A-217ENST00000584582 CHSY3Q70JA7 882 aa11.08□□□□□ -0.63
TOP3A-217ENST00000584582 TEX26Q8N6G2 289 aa11.08□□□□□ -0.63
TOP3A-217ENST00000584582 POF1BQ8WVV4 589 aa11.08□□□□□ -0.63
TOP3A-217ENST00000584582 ROGDIQ9GZN7 287 aa11.08□□□□□ -0.63
TOP3A-217ENST00000584582 RERGLQ9H628 205 aa11.08□□□□□ -0.63
TOP3A-217ENST00000584582 DHRS7Q9Y394 339 aa11.08□□□□□ -0.63
TOP3A-217ENST00000584582 FADS3Q9Y5Q0 445 aa11.08□□□□□ -0.63
TOP3A-217ENST00000584582 ARID1BQ8NFD5 2236 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-217ENST00000584582 RANBP2P49792 3224 aaKnown RBP11.08□□□□□ -0.64
TOP3A-217ENST00000584582 WASH3PC4AMC7 463 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 GRM6O15303 877 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 VPS4BO75351 444 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 CLDN9O95484 217 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 POP4O95707 220 aaKnown RBP11.08□□□□□ -0.64
TOP3A-217ENST00000584582 FGBP02675 491 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 ALOX15P16050 662 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-217ENST00000584582 NSG1P42857 185 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 PRIM2P49643 509 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 PHEXP78562 749 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 MTA1Q13330 715 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 BIRC2Q13490 618 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 NADK2Q4G0N4 442 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 TMEM220Q6QAJ8 160 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 GET4Q7L5D6 327 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-217ENST00000584582 GPR180Q86V85 440 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 HORMAD1Q86X24 394 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 YAF2Q8IY57 180 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 NXPE1Q8N323 547 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 SFRP1Q8N474 314 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 BPIFB6Q8NFQ5 453 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 ISL2Q96A47 359 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 POLR1BQ9H9Y6 1135 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 CAPN10Q9HC96 672 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 KCTD5Q9NXV2 234 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 NUDT4Q9NZJ9 180 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 PHF24Q9UPV7 400 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 BRWD1Q9NSI6 2320 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 hCG_2039718K7EN88 272 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 K7EPI3 171 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 ADSLP30566 484 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-217ENST00000584582 ZXDBP98169 803 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 MRPL58Q14197 206 aaKnown RBP11.08□□□□□ -0.64
TOP3A-217ENST00000584582 RGL4Q8IZJ4 473 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 SMG7Q92540 1137 aaKnown RBP11.08□□□□□ -0.64
TOP3A-217ENST00000584582 BIRC8Q96P09 236 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 CMTM6Q9NX76 183 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 ASF1AQ9Y294 204 aa11.08□□□□□ -0.64
TOP3A-217ENST00000584582 A0A1W2PP18 115 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 H3BSA7 217 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 IFRD1O00458 451 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-217ENST00000584582 FOXD2O60548 495 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-217ENST00000584582 MTHFRP42898 656 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 CRATP43155 626 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 BDKRB1P46663 353 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 RPL5P46777 297 aaKnown RBP11.07□□□□□ -0.64
TOP3A-217ENST00000584582 HSPA13P48723 471 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 PRKCQQ04759 706 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 PWP1Q13610 501 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 GPR107Q5VW38 600 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 OR4F3Q6IEY1 312 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 ERAP2Q6P179 960 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 PRMT9Q6P2P2 845 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 CRTC1Q6UUV9 634 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 GPR141Q7Z602 305 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 FAM124AQ86V42 546 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 CHPFQ8IZ52 775 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 SLC39A11Q8N1S5 342 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 ZNF555Q8NEP9 628 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 OR2T11Q8NH01 316 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 SLC13A3Q8WWT9 602 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 EGLN2Q96KS0 407 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 TRAPPC9Q96Q05 1148 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 VN1R3Q9BXE9 311 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 OR2AG1Q9H205 316 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 SNX5Q9Y5X3 404 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 PDZK1P1A8MUH7 402 aa11.07□□□□□ -0.64
TOP3A-217ENST00000584582 SOCS2O14508 198 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms