RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 C19orf18Q8NEA5 215 aa9.27□□□□□ -0.93
SKA2-207ENST00000583380 FAM83FQ8NEG4 500 aaPredicted RBP9.27□□□□□ -0.93
SKA2-207ENST00000583380 OR52H1Q8NGJ2 320 aa9.27□□□□□ -0.93
SKA2-207ENST00000583380 SPPL2BQ8TCT7 592 aa9.27□□□□□ -0.93
SKA2-207ENST00000583380 BTN2A2Q8WVV5 523 aa9.27□□□□□ -0.93
SKA2-207ENST00000583380 ATOH1Q92858 354 aaPredicted RBP9.27□□□□□ -0.93
SKA2-207ENST00000583380 RAD51AP1Q96B01 352 aa9.27□□□□□ -0.93
SKA2-207ENST00000583380 PDLIM5Q96HC4 596 aaKnown RBP9.27□□□□□ -0.93
SKA2-207ENST00000583380 COL21A1Q96P44 957 aa9.27□□□□□ -0.93
SKA2-207ENST00000583380 C1QTNF1Q9BXJ1 281 aa9.27□□□□□ -0.93
SKA2-207ENST00000583380 ABCC13Q9NSE7 274 aa9.27□□□□□ -0.93
SKA2-207ENST00000583380 RBFOX1Q9NWB1 397 aaKnown RBP9.27□□□□□ -0.93
SKA2-207ENST00000583380 TMEM260Q9NX78 707 aa9.27□□□□□ -0.93
SKA2-207ENST00000583380 COPZ2Q9P299 210 aa9.27□□□□□ -0.93
SKA2-207ENST00000583380 PRKAG2Q9UGJ0 569 aa9.27□□□□□ -0.93
SKA2-207ENST00000583380 MLXQ9UH92 298 aa9.27□□□□□ -0.93
SKA2-207ENST00000583380 NUFIP1Q9UHK0 495 aaKnown RBP9.27□□□□□ -0.93
SKA2-207ENST00000583380 LEF1Q9UJU2 399 aaPredicted RBP9.27□□□□□ -0.93
SKA2-207ENST00000583380 ACOT9Q9Y305 439 aa9.27□□□□□ -0.93
SKA2-207ENST00000583380 PCDHA9Q9Y5H5 950 aa9.27□□□□□ -0.93
SKA2-207ENST00000583380 DDX60LQ5H9U9 1706 aaKnown RBP9.27□□□□□ -0.93
SKA2-207ENST00000583380 RICTORQ6R327 1708 aa9.27□□□□□ -0.93
SKA2-207ENST00000583380 KIAA1551Q9HCM1 1747 aa9.27□□□□□ -0.93
SKA2-207ENST00000583380 BAZ2BQ9UIF8 2168 aaKnown RBP9.26□□□□□ -0.93
SKA2-207ENST00000583380 C17orf113A0A1B0GUU1 675 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 A0A1W2PP18 115 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 TCRBV7S3A2A0A539 114 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 TCRBV5S1A1TA0A578 114 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 K7ENM7 598 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 GNGT2O14610 69 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 PRMT5O14744 637 aaPredicted RBP9.26□□□□□ -0.93
SKA2-207ENST00000583380 ZBTB24O43167 697 aaPredicted RBP9.26□□□□□ -0.93
SKA2-207ENST00000583380 DPM1O60762 260 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 TNFRSF21O75509 655 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 SCELO95171 688 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 FABP1P07148 127 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 LTA4HP09960 611 aaKnown RBP9.26□□□□□ -0.93
SKA2-207ENST00000583380 SAGP10523 405 aaPredicted RBP9.26□□□□□ -0.93
SKA2-207ENST00000583380 ANXA3P12429 323 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 MPSTP25325 297 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 GTF2E2P29084 291 aaKnown RBP9.26□□□□□ -0.93
SKA2-207ENST00000583380 BRCC3P46736 316 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 RFX2P48378 723 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 GDF10P55107 478 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 EEF1A1P68104 462 aaKnown RBP9.26□□□□□ -0.93
SKA2-207ENST00000583380 IL5RAQ01344 420 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 SLC25A11Q02978 314 aaKnown RBP9.26□□□□□ -0.93
SKA2-207ENST00000583380 EEF1A2Q05639 463 aaKnown RBP9.26□□□□□ -0.93
SKA2-207ENST00000583380 BTN1A1Q13410 526 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 PUM1Q14671 1186 aaKnown RBP eCLIP9.26□□□□□ -0.93
SKA2-207ENST00000583380 RPS6KA2Q15349 733 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 IMPG1Q17R60 797 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 RNF212Q495C1 297 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 GPR33Q49SQ1 333 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 ANKRD39Q53RE8 183 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 PABPC1L2AQ5JQF8 200 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 EEF1A1P5Q5VTE0 462 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 NXNL2Q5VZ03 156 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 ZNF425Q6IV72 752 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 PYHIN1Q6K0P9 492 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 SLC27A4Q6P1M0 643 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 TXNDC11Q6PKC3 985 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 KIAA1324Q6UXG2 1013 aaKnown RBP9.26□□□□□ -0.93
SKA2-207ENST00000583380 ANKS3Q6ZW76 656 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 IKBIPQ70UQ0 350 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 SLC26A9Q7LBE3 791 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 CHST15Q7LFX5 561 aaPredicted RBP9.26□□□□□ -0.93
SKA2-207ENST00000583380 CPNE8Q86YQ8 564 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 NIM1KQ8IY84 436 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 TBC1D19Q8N5T2 526 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 FAM156AQ8NDB6 213 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 ZNF540Q8NDQ6 660 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 POMGNT1Q8WZA1 660 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 TMBIM1Q969X1 311 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 NSUN4Q96CB9 384 aaKnown RBP9.26□□□□□ -0.93
SKA2-207ENST00000583380 PPP1R2P1Q96PQ5 205 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 TRNT1Q96Q11 434 aaKnown RBP9.26□□□□□ -0.93
SKA2-207ENST00000583380 FIZ1Q96SL8 496 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 MARVELD1Q9BSK0 173 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 HDHD5Q9BXW7 423 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.26□□□□□ -0.93
SKA2-207ENST00000583380 POLR1EQ9GZS1 481 aaKnown RBP9.26□□□□□ -0.93
SKA2-207ENST00000583380 RNF32Q9H0A6 362 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 ABCG4Q9H172 646 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 PCIF1Q9H4Z3 704 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 NMUR1Q9HB89 426 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 EQTNQ9NQ60 294 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 SMYD2Q9NRG4 433 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 COA4Q9NYJ1 87 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 ACTR10Q9NZ32 417 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 MALT1Q9UDY8 824 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 AGO1Q9UL18 857 aaKnown RBP9.26□□□□□ -0.93
SKA2-207ENST00000583380 BTRCQ9Y297 605 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 BOLA1Q9Y3E2 137 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 SIPA1L1O43166 1804 aa9.26□□□□□ -0.93
SKA2-207ENST00000583380 CACNA1SQ13698 1873 aa9.25□□□□□ -0.93
SKA2-207ENST00000583380 A0A0G2JPF8 293 aa9.25□□□□□ -0.93
SKA2-207ENST00000583380 HNRNPCL3B7ZW38 293 aa9.25□□□□□ -0.93
SKA2-207ENST00000583380 MCIDASD6RGH6 385 aa9.25□□□□□ -0.93
SKA2-207ENST00000583380 PSMD9O00233 223 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms