RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 Q6ZVL8 140 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 DHDDSQ86SQ9 333 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 FUNDC1Q8IVP5 155 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 OR9I1Q8NGQ6 314 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 OR8D1Q8WZ84 308 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 HIST1H2AHQ96KK5 128 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 VPS35Q96QK1 796 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 HIST1H2AJQ99878 128 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 HOPXQ9BPY8 73 aaPredicted RBP22.21■■□□□ 1.15
CCDC47-204ENST00000582252 TMEM79Q9BSE2 394 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 H2AFJQ9BTM1 129 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 PLA2G2FQ9BZM2 168 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 BRINP2Q9C0B6 783 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 HPS4Q9NQG7 708 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 TMPRSS11EQ9UL52 423 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 GPR45Q9Y5Y3 372 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 PRUNE2Q8WUY3 3088 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 GRXCR2A6NFK2 248 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 WDR47O94967 919 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 EPB42P16452 691 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 CYP2A7P20853 494 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 DPP6P42658 865 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 RPIAP49247 311 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 TRAF3Q13114 568 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 MAP7D1Q3KQU3 841 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 SAMD4BQ5PRF9 694 aaKnown RBP22.2■■□□□ 1.14
CCDC47-204ENST00000582252 IL27RAQ6UWB1 636 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 UBE2R2Q712K3 238 aaPredicted RBP22.2■■□□□ 1.14
CCDC47-204ENST00000582252 NRG4Q8WWG1 115 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 ABCG8Q9H221 673 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 ZIM2Q9NZV7 527 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 GIMAP2Q9UG22 337 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 TRPS1Q9UHF7 1281 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 ST14Q9Y5Y6 855 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 H0Y858 1186 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 KPNA3O00505 521 aaPredicted RBP22.2■■□□□ 1.14
CCDC47-204ENST00000582252 STK16O75716 305 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 STAMBPO95630 424 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 EBLN1P0CF75 366 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 XRCC1P18887 633 aaPredicted RBP22.2■■□□□ 1.14
CCDC47-204ENST00000582252 ETV3P41162 512 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 HNMTP50135 292 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 ERFP50548 548 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 KCNK10P57789 538 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 ELP6Q0PNE2 266 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 HSPA14Q0VDF9 509 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 C18orf21Q32NC0 220 aaPredicted RBP22.2■■□□□ 1.14
CCDC47-204ENST00000582252 DET1Q7L5Y6 550 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 TECPR1Q7Z6L1 1165 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 FNDC5Q8NAU1 212 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 HIPK4Q8NE63 616 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 TMIEQ8NEW7 156 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 SCAMP4Q969E2 229 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 ASB9Q96DX5 294 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 ZNF570Q96NI8 536 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 CDK15Q96Q40 435 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 ACOX2Q99424 681 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 NTMT1Q9BV86 223 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 RIOK2Q9BVS4 552 aaKnown RBP22.2■■□□□ 1.14
CCDC47-204ENST00000582252 TRMT61BQ9BVS5 477 aaKnown RBP22.2■■□□□ 1.14
CCDC47-204ENST00000582252 SLC12A9Q9BXP2 914 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 PARVBQ9HBI1 364 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 ARL15Q9NXU5 204 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 SUN2Q9UH99 717 aa22.2■■□□□ 1.14
CCDC47-204ENST00000582252 MBTPS2O43462 519 aa22.19■■□□□ 1.14
CCDC47-204ENST00000582252 SYNCRIPO60506 623 aaKnown RBP22.19■■□□□ 1.14
CCDC47-204ENST00000582252 BCAS2O75934 225 aaPredicted RBP22.19■■□□□ 1.14
CCDC47-204ENST00000582252 GDI1P31150 447 aa22.19■■□□□ 1.14
CCDC47-204ENST00000582252 FOXM1Q08050 763 aa22.19■■□□□ 1.14
CCDC47-204ENST00000582252 HTR4Q13639 388 aa22.19■■□□□ 1.14
CCDC47-204ENST00000582252 RUNX3Q13761 415 aa22.19■■□□□ 1.14
CCDC47-204ENST00000582252 SMU1Q2TAY7 513 aa22.19■■□□□ 1.14
CCDC47-204ENST00000582252 PARS2Q7L3T8 475 aaKnown RBP22.19■■□□□ 1.14
CCDC47-204ENST00000582252 LRRC70Q7Z2Q7 622 aa22.19■■□□□ 1.14
CCDC47-204ENST00000582252 UCMAQ8WVF2 138 aa22.19■■□□□ 1.14
CCDC47-204ENST00000582252 SKA2Q8WVK7 121 aaPredicted RBP22.19■■□□□ 1.14
CCDC47-204ENST00000582252 BTN2A2Q8WVV5 523 aa22.19■■□□□ 1.14
CCDC47-204ENST00000582252 ASZ1Q8WWH4 475 aa22.19■■□□□ 1.14
CCDC47-204ENST00000582252 PPP1R16AQ96I34 528 aa22.19■■□□□ 1.14
CCDC47-204ENST00000582252 PPP3R2Q96LZ3 170 aa22.19■■□□□ 1.14
CCDC47-204ENST00000582252 GUCD1Q96NT3 240 aa22.19■■□□□ 1.14
CCDC47-204ENST00000582252 TICRRQ7Z2Z1 1910 aa22.19■■□□□ 1.14
CCDC47-204ENST00000582252 MYO10Q9HD67 2058 aa22.19■■□□□ 1.14
CCDC47-204ENST00000582252 DYTNA2CJ06 578 aa22.18■■□□□ 1.14
CCDC47-204ENST00000582252 ANHXE9PGG2 379 aa22.18■■□□□ 1.14
CCDC47-204ENST00000582252 SLC28A1O00337 649 aa22.18■■□□□ 1.14
CCDC47-204ENST00000582252 ITGB7P26010 798 aa22.18■■□□□ 1.14
CCDC47-204ENST00000582252 GGT5P36269 586 aa22.18■■□□□ 1.14
CCDC47-204ENST00000582252 TRAP1Q12931 704 aaKnown RBP22.18■■□□□ 1.14
CCDC47-204ENST00000582252 BOP1Q14137 746 aaKnown RBP22.18■■□□□ 1.14
CCDC47-204ENST00000582252 ACOX1Q15067 660 aa22.18■■□□□ 1.14
CCDC47-204ENST00000582252 HNRNPA1L2Q32P51 320 aaKnown RBP22.18■■□□□ 1.14
CCDC47-204ENST00000582252 C6orf136Q5SQH8 315 aa22.18■■□□□ 1.14
CCDC47-204ENST00000582252 FAM219BQ5XKK7 198 aa22.18■■□□□ 1.14
CCDC47-204ENST00000582252 C8orf82Q6P1X6 216 aaPredicted RBP22.18■■□□□ 1.14
CCDC47-204ENST00000582252 BLOC1S3Q6QNY0 202 aa22.18■■□□□ 1.14
CCDC47-204ENST00000582252 LIPIQ6XZB0 460 aa22.18■■□□□ 1.14
CCDC47-204ENST00000582252 ELMO1Q92556 727 aa22.18■■□□□ 1.14
CCDC47-204ENST00000582252 SLC29A3Q9BZD2 475 aa22.18■■□□□ 1.14
CCDC47-204ENST00000582252 MTG2Q9H4K7 406 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms