RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 WWP1Q9H0M0 922 aa11.25□□□□□ -0.61
GGA3-211ENST00000582232 VPS11Q9H270 941 aa11.25□□□□□ -0.61
GGA3-211ENST00000582232 OSGEPL1Q9H4B0 414 aa11.25□□□□□ -0.61
GGA3-211ENST00000582232 SMOC1Q9H4F8 434 aa11.25□□□□□ -0.61
GGA3-211ENST00000582232 IL21RQ9HBE5 538 aa11.25□□□□□ -0.61
GGA3-211ENST00000582232 NMRAL1Q9HBL8 299 aa11.25□□□□□ -0.61
GGA3-211ENST00000582232 SSU72Q9NP77 194 aaKnown RBP11.25□□□□□ -0.61
GGA3-211ENST00000582232 FSCN3Q9NQT6 498 aa11.25□□□□□ -0.61
GGA3-211ENST00000582232 PRDM8Q9NQV8 689 aa11.25□□□□□ -0.61
GGA3-211ENST00000582232 IGSF5Q9NSI5 407 aa11.25□□□□□ -0.61
GGA3-211ENST00000582232 UCKL1Q9NWZ5 548 aa11.25□□□□□ -0.61
GGA3-211ENST00000582232 NCDNQ9UBB6 729 aa11.25□□□□□ -0.61
GGA3-211ENST00000582232 FAM8A1Q9UBU6 413 aa11.25□□□□□ -0.61
GGA3-211ENST00000582232 DCDC2Q9UHG0 476 aa11.25□□□□□ -0.61
GGA3-211ENST00000582232 WDR37Q9Y2I8 494 aa11.25□□□□□ -0.61
GGA3-211ENST00000582232 RIF1Q5UIP0 2472 aaKnown RBP11.25□□□□□ -0.61
GGA3-211ENST00000582232 ZNF292O60281 2723 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 GOLGA4Q13439 2230 aaKnown RBP11.24□□□□□ -0.61
GGA3-211ENST00000582232 KIR2DS5A0A0G2JLQ3 304 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 A0A0G2JNG1 304 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 FOXO6A8MYZ6 492 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 KIR2DS3K7RE56 304 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 IFRD1O00458 451 aaPredicted RBP11.24□□□□□ -0.61
GGA3-211ENST00000582232 SLC16A5O15375 505 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 PSIP1O75475 530 aaKnown RBP11.24□□□□□ -0.61
GGA3-211ENST00000582232 EML2O95834 649 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 C8GP07360 202 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 ANXA6P08133 673 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 CD1DP15813 335 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 XRCC1P18887 633 aaPredicted RBP11.24□□□□□ -0.61
GGA3-211ENST00000582232 RPL10P27635 214 aaKnown RBP11.24□□□□□ -0.61
GGA3-211ENST00000582232 HALP42357 657 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 CCT5P48643 541 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 IRF9Q00978 393 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 SPEM2Q0P670 501 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 SP140Q13342 867 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 CSHL1Q14406 222 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 KIR2DS5Q14953 304 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 CLCA4Q14CN2 919 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 ACAP2Q15057 778 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 TCEAL6Q6IPX3 200 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 PIWIL4Q7Z3Z4 852 aaKnown RBP11.24□□□□□ -0.61
GGA3-211ENST00000582232 SRRM1Q8IYB3 904 aaKnown RBP11.24□□□□□ -0.61
GGA3-211ENST00000582232 NAGSQ8N159 534 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 PLD6Q8N2A8 252 aaKnown RBP11.24□□□□□ -0.61
GGA3-211ENST00000582232 MINDY1Q8N5J2 469 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 BANPQ8N9N5 519 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 FAM46DQ8NEK8 389 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 RHEBL1Q8TAI7 183 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 KCTD4Q8WVF5 259 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 TFGQ92734 400 aaPredicted RBP11.24□□□□□ -0.61
GGA3-211ENST00000582232 TCEAL3Q969E4 200 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 KIAA1191Q96A73 305 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 ARL8AQ96BM9 186 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 NXNL1Q96CM4 212 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 ATP6V1G3Q96LB4 118 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 RMDN2Q96LZ7 410 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 FOPNLQ96NB1 174 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 SMC6Q96SB8 1091 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 INSM2Q96T92 566 aaPredicted RBP11.24□□□□□ -0.61
GGA3-211ENST00000582232 DUSP23Q9BVJ7 150 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 CENPHQ9H3R5 247 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 TFB2MQ9H5Q4 396 aaKnown RBP11.24□□□□□ -0.61
GGA3-211ENST00000582232 SEMA4GQ9NTN9 838 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 PCMTD2Q9NV79 361 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 NLGN3Q9NZ94 848 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 NOVA2Q9UNW9 492 aaKnown RBP11.24□□□□□ -0.61
GGA3-211ENST00000582232 HEBP2Q9Y5Z4 205 aa11.24□□□□□ -0.61
GGA3-211ENST00000582232 ZFHX2Q9C0A1 2572 aaPredicted RBP11.23□□□□□ -0.61
GGA3-211ENST00000582232 ANKRD12Q6UB98 2062 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 PDZK1P1A8MUH7 402 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 HMGB1P1B2RPK0 211 aaPredicted RBP11.23□□□□□ -0.61
GGA3-211ENST00000582232 GOLGA8RI6L899 631 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 CDX4O14627 284 aaPredicted RBP11.23□□□□□ -0.61
GGA3-211ENST00000582232 SNX2O60749 519 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 SDC3O75056 442 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 GLRA3O75311 464 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 SYF2O95926 243 aaKnown RBP11.23□□□□□ -0.61
GGA3-211ENST00000582232 RPN2P04844 631 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 ENO2P09104 434 aaPredicted RBP11.23□□□□□ -0.61
GGA3-211ENST00000582232 MTHFD1P11586 935 aaKnown RBP11.23□□□□□ -0.61
GGA3-211ENST00000582232 NDUFS1P28331 727 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 KPNA2P52292 529 aaKnown RBP11.23□□□□□ -0.61
GGA3-211ENST00000582232 ATXN3P54252 364 aaPredicted RBP11.23□□□□□ -0.61
GGA3-211ENST00000582232 NHLH1Q02575 133 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 SLC14A1Q13336 389 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 SUZ12Q15022 739 aaKnown RBP11.23□□□□□ -0.61
GGA3-211ENST00000582232 SF3A2Q15428 464 aaKnown RBP11.23□□□□□ -0.61
GGA3-211ENST00000582232 RPE65Q16518 533 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 C6orf132Q5T0Z8 1188 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 KLC3Q6P597 504 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 ADAMTSL2Q86TH1 951 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 ISCA2Q86U28 154 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 SPNS2Q8IVW8 549 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 TBC1D21Q8IYX1 336 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 C4orf33Q8N1A6 199 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 SFRP1Q8N474 314 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 GOLGA6L1Q8N7Z2 621 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 AVL9Q8NBF6 648 aa11.23□□□□□ -0.61
GGA3-211ENST00000582232 GPR156Q8NFN8 814 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms