RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 RALGDSQ12967 914 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 STX5Q13190 355 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 SGCGQ13326 291 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 SP140Q13342 867 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 CUL3Q13618 768 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 GTF2H2Q13888 395 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 SIM2Q14190 667 aaPredicted RBP9.11□□□□□ -0.95
SS18-220ENST00000582092 SQLEQ14534 574 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 PCBP2Q15366 365 aaKnown RBP eCLIP9.11□□□□□ -0.959e-6■□□□□ 8.7
SS18-220ENST00000582092 KIF19Q2TAC6 998 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 GAB4Q2WGN9 574 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 CDKL4Q5MAI5 379 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 EOGTQ5NDL2 527 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 HENMT1Q5T8I9 393 aaKnown RBP9.11□□□□□ -0.95
SS18-220ENST00000582092 FBXW10Q5XX13 1052 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 EGFLAMQ63HQ2 1017 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 ZNF776Q68DI1 518 aaPredicted RBP9.11□□□□□ -0.95
SS18-220ENST00000582092 CLEC6AQ6EIG7 209 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 GTF2H2CQ6P1K8 395 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 CYB5D1Q6P9G0 228 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 TMEM220Q6QAJ8 160 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 C16orf89Q6UX73 402 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 PRR23BQ6ZRT6 265 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 RINLQ6ZS11 566 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 NEK10Q6ZWH5 1172 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 ASCL5Q7RTU5 278 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 MAVSQ7Z434 540 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 MILR1Q7Z6M3 343 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 WDR5BQ86VZ2 330 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 HDDC3Q8N4P3 179 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 SNX31Q8N9S9 440 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 DDHD1Q8NEL9 900 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 CFAP61Q8NHU2 1237 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 GIMAP7Q8NHV1 300 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 RP9Q8TA86 221 aaKnown RBP9.11□□□□□ -0.95
SS18-220ENST00000582092 ZNF483Q8TF39 744 aaPredicted RBP9.11□□□□□ -0.95
SS18-220ENST00000582092 STMN2Q93045 179 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 TUBGCP3Q96CW5 907 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 ERLEC1Q96DZ1 483 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 C19orf60Q96EN9 201 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 DTD2Q96FN9 168 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 ZNF514Q96K75 400 aaPredicted RBP9.11□□□□□ -0.95
SS18-220ENST00000582092 OR52B2Q96RD2 323 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 FAM129BQ96TA1 746 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 SERPINI1Q99574 410 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 C1QTNF7Q9BXJ2 289 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 NUSAP1Q9BXS6 441 aaKnown RBP9.11□□□□□ -0.95
SS18-220ENST00000582092 MEAF6Q9HAF1 191 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 FBRSQ9HAH7 460 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 RDH14Q9HBH5 336 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 PARVBQ9HBI1 364 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 POLMQ9NP87 494 aaPredicted RBP9.11□□□□□ -0.95
SS18-220ENST00000582092 FAM8A1Q9UBU6 413 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 EIF2B4Q9UI10 523 aaKnown RBP9.11□□□□□ -0.95
SS18-220ENST00000582092 ITM2BQ9Y287 266 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 WDFY4Q6ZS81 3184 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 THADAQ6YHU6 1953 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 LRRC14BA6NHZ5 514 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 CAPN14A8MX76 684 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 SDHDO14521 159 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 GSC2O15499 205 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 FOXD2O60548 495 aaPredicted RBP9.1□□□□□ -0.95
SS18-220ENST00000582092 MTX2O75431 263 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 STK16O75716 305 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 RNASEH2AO75792 299 aaKnown RBP9.1□□□□□ -0.95
SS18-220ENST00000582092 APBB3O95704 486 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 ESRRBO95718 433 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 TSPAN12O95859 305 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 CATP04040 527 aaKnown RBP9.1□□□□□ -0.95
SS18-220ENST00000582092 RPS17P08708 135 aaKnown RBP9.1□□□□□ -0.95
SS18-220ENST00000582092 KRT16P08779 473 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 GSTM1P09488 218 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 ACADMP11310 421 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 C6P13671 934 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 HGFP14210 728 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 LBPP18428 481 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 PIK3R1P27986 724 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 PBLDP30039 288 aaPredicted RBP9.1□□□□□ -0.95
SS18-220ENST00000582092 NTSR1P30989 418 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 CCR7P32248 378 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 P2RY2P41231 377 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 FNTBP49356 437 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 AGTR2P50052 363 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 HNMTP50135 292 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 SH3BP2P78314 561 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 GSTM4Q03013 218 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 CNTN1Q12860 1018 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 ABRQ12979 859 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 TUBB3Q13509 450 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 GAS6Q14393 721 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 CST6Q15828 149 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 C2orf27AQ580R0 203 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 LAIR1Q6GTX8 287 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 METTL2BQ6P1Q9 378 aaKnown RBP9.1□□□□□ -0.95
SS18-220ENST00000582092 SPATA19Q7Z5L4 167 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 C11orf74Q86VG3 221 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 NLRP8Q86W28 1048 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 MYLK4Q86YV6 388 aaPredicted RBP9.1□□□□□ -0.95
SS18-220ENST00000582092 TREML1Q86YW5 311 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 TRAPPC5Q8IUR0 188 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms