RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 MPP1Q00013 466 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 POU4F1Q01851 419 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 TCEA2Q15560 299 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 KBTBD12Q3ZCT8 623 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 ZNF789Q5FWF6 425 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 ZNF549Q6P9A3 640 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 WDR74Q6RFH5 385 aaPredicted RBP12.08□□□□□ -0.48
RARA-208ENST00000577646 SPRED1Q7Z699 444 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 RAB44Q7Z6P3 723 aaPredicted RBP12.08□□□□□ -0.48
RARA-208ENST00000577646 ZC3HC1Q86WB0 502 aaKnown RBP12.08□□□□□ -0.48
RARA-208ENST00000577646 LRRN4CLQ8ND94 238 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 ACVR1CQ8NER5 493 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 TSPAN17Q96FV3 270 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 PDLIM5Q96HC4 596 aaKnown RBP12.08□□□□□ -0.48
RARA-208ENST00000577646 RMDN2Q96LZ7 410 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 CCDC77Q9BR77 488 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 TRIT1Q9H3H1 467 aaKnown RBP12.08□□□□□ -0.48
RARA-208ENST00000577646 LRRN3Q9H3W5 708 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 TFB2MQ9H5Q4 396 aaKnown RBP12.08□□□□□ -0.48
RARA-208ENST00000577646 KIR3DX1Q9H7L2 352 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 CAAP1Q9H8G2 361 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 ANKZF1Q9H8Y5 726 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 PPCSQ9HAB8 311 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 SYTL2Q9HCH5 934 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 KCNK4Q9NYG8 393 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 SCHIP1Q9P0W5 487 aaPredicted RBP12.08□□□□□ -0.48
RARA-208ENST00000577646 EPHA6Q9UF33 1036 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 RABGEF1Q9UJ41 708 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 TRMT6Q9UJA5 497 aaKnown RBP12.08□□□□□ -0.48
RARA-208ENST00000577646 PSMD13Q9UNM6 376 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 CACNA1GO43497 2377 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 FRYQ5TBA9 3013 aa12.08□□□□□ -0.48
RARA-208ENST00000577646 ASPMQ8IZT6 3477 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 IGHV1OR21-1A0A087WYE8 117 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 IQCF5A8MTL0 148 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 TOX3O15405 576 aaPredicted RBP12.07□□□□□ -0.48
RARA-208ENST00000577646 DUX1O43812 170 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 NIPSNAP2O75323 286 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 MATN4O95460 622 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 CPNE6O95741 557 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 PDHA2P29803 388 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 SERPINB9P50453 376 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 SLC12A2P55011 1212 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 TRA2AQ13595 282 aaKnown RBP eCLIP12.07□□□□□ -0.48
RARA-208ENST00000577646 SPIDRQ14159 915 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 SEPT7Q16181 437 aaKnown RBP12.07□□□□□ -0.48
RARA-208ENST00000577646 PERM1Q5SV97 790 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 LGSNQ5TDP6 509 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 HECTD2Q5U5R9 776 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 CDCP2Q5VXM1 449 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 EMBQ6PCB8 327 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 RBM44Q6ZP01 1051 aaKnown RBP12.07□□□□□ -0.48
RARA-208ENST00000577646 TAOK1Q7L7X3 1001 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 PIM3Q86V86 326 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 PLXDC1Q8IUK5 500 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 CTAGE3PQ8IX95 158 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 CARFQ8N187 725 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 KRT222Q8N1A0 295 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 PNPLA1Q8N8W4 532 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 FBXO15Q8NCQ5 510 aaPredicted RBP12.07□□□□□ -0.48
RARA-208ENST00000577646 OR5K2Q8NHB8 316 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 PATE1Q8WXA2 126 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 AHCYL2Q96HN2 611 aaKnown RBP12.07□□□□□ -0.48
RARA-208ENST00000577646 TMEM74Q96NL1 305 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 DEPDC7Q96QD5 511 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 FERD3LQ96RJ6 166 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 GFM1Q96RP9 751 aaKnown RBP12.07□□□□□ -0.48
RARA-208ENST00000577646 RBBP8Q99708 897 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 SCNM1Q9BWG6 230 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 RAB11FIP5Q9BXF6 653 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 TXLNGYQ9BZA5 131 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 IMP3Q9NV31 184 aaKnown RBP12.07□□□□□ -0.48
RARA-208ENST00000577646 ASF1AQ9Y294 204 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 IKBKGQ9Y6K9 419 aa12.07□□□□□ -0.48
RARA-208ENST00000577646 GOLGA4Q13439 2230 aaKnown RBP12.07□□□□□ -0.48
RARA-208ENST00000577646 ZZEF1O43149 2961 aa12.06□□□□□ -0.48
RARA-208ENST00000577646 TRBV23OR9-2A0A075B6M9 112 aa12.06□□□□□ -0.48
RARA-208ENST00000577646 CCDC189A1A4V9 331 aa12.06□□□□□ -0.48
RARA-208ENST00000577646 OR52A4PA6NMU1 304 aa12.06□□□□□ -0.48
RARA-208ENST00000577646 SLC16A5O15375 505 aa12.06□□□□□ -0.48
RARA-208ENST00000577646 B4GAT1O43505 415 aa12.06□□□□□ -0.48
RARA-208ENST00000577646 HYAL3O43820 417 aaPredicted RBP12.06□□□□□ -0.48
RARA-208ENST00000577646 UBXN7O94888 489 aa12.06□□□□□ -0.48
RARA-208ENST00000577646 SPINK2P20155 84 aa12.06□□□□□ -0.48
RARA-208ENST00000577646 FDXRP22570 491 aa12.06□□□□□ -0.48
RARA-208ENST00000577646 ALDH4A1P30038 563 aa12.06□□□□□ -0.48
RARA-208ENST00000577646 HSD17B2P37059 387 aa12.06□□□□□ -0.48
RARA-208ENST00000577646 SLC26A3P40879 764 aa12.06□□□□□ -0.48
RARA-208ENST00000577646 PREPP48147 710 aa12.06□□□□□ -0.48
RARA-208ENST00000577646 LIMK2P53671 638 aa12.06□□□□□ -0.48
RARA-208ENST00000577646 IL2P60568 153 aa12.06□□□□□ -0.48
RARA-208ENST00000577646 PDAP1Q13442 181 aaKnown RBP12.06□□□□□ -0.48
RARA-208ENST00000577646 CAPN12Q6ZSI9 719 aa12.06□□□□□ -0.48
RARA-208ENST00000577646 TMPRSS7Q7RTY8 843 aa12.06□□□□□ -0.48
RARA-208ENST00000577646 DCUN1D3Q8IWE4 304 aa12.06□□□□□ -0.48
RARA-208ENST00000577646 RAB42Q8N4Z0 105 aa12.06□□□□□ -0.48
RARA-208ENST00000577646 NKAPQ8N5F7 415 aaKnown RBP12.06□□□□□ -0.48
RARA-208ENST00000577646 LILRA3Q8N6C8 439 aaPredicted RBP12.06□□□□□ -0.48
RARA-208ENST00000577646 PPM1NQ8N819 430 aa12.06□□□□□ -0.48
RARA-208ENST00000577646 DCBLD1Q8N8Z6 715 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms