RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 SP5Q6BEB4 398 aaPredicted RBP12.94□□□□□ -0.34
COPS3-214ENST00000577246 FCRL6Q6DN72 434 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 RHBDD2Q6NTF9 364 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 SARM1Q6SZW1 724 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 SPOCD1Q6ZMY3 1216 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 MCEMP1Q8IX19 187 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 ZNF398Q8TD17 642 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 BLOC1S5Q8TDH9 187 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 CTNNBL1Q8WYA6 563 aaPredicted RBP12.94□□□□□ -0.34
COPS3-214ENST00000577246 RAPGEF5Q92565 580 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 INPP5DQ92835 1189 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 DCUN1D1Q96GG9 259 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 RMDN2Q96LZ7 410 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 TEKT5Q96M29 485 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 OLFM3Q96PB7 478 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 GBP5Q96PP8 586 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 TRAPPC9Q96Q05 1148 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 ANP32EQ9BTT0 268 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 VPS37BQ9H9H4 285 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 TXLNGQ9NUQ3 528 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 UBP1Q9NZI7 540 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 FAM8A1Q9UBU6 413 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 NTNG1Q9Y2I2 539 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 CSMD1Q96PZ7 3565 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 PRRC2CQ9Y520 2896 aaKnown RBP12.93□□□□□ -0.34
COPS3-214ENST00000577246 A0A087X0T9 212 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 A0A1W2PQJ5 194 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 CCDC66A2RUB6 948 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 CFAP99D6REC4 459 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 AGPSO00116 658 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 STX7O15400 261 aaKnown RBP12.93□□□□□ -0.34
COPS3-214ENST00000577246 GPR39O43194 453 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 POLBP06746 335 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 H2AFZP0C0S5 128 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 FAM228BP0C875 321 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 PRF1P14222 555 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 CA5AP35218 305 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 TSFMP43897 325 aaKnown RBP12.93□□□□□ -0.34
COPS3-214ENST00000577246 ZXDCQ2QGD7 858 aaPredicted RBP12.93□□□□□ -0.34
COPS3-214ENST00000577246 AGAP7PQ5VUJ5 663 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 CDHR3Q6ZTQ4 885 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 H2AFVQ71UI9 128 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 AMIGO1Q86WK6 493 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 CFAP206Q8IYR0 622 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 HEXDCQ8WVB3 486 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 IQCDQ96DY2 449 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 RBM41Q96IZ5 413 aaKnown RBP12.93□□□□□ -0.34
COPS3-214ENST00000577246 VPS50Q96JG6 964 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 AGAP4Q96P64 663 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 FERD3LQ96RJ6 166 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 UNKQ9C0B0 810 aaKnown RBP12.93□□□□□ -0.34
COPS3-214ENST00000577246 TFB2MQ9H5Q4 396 aaKnown RBP12.93□□□□□ -0.34
COPS3-214ENST00000577246 EPS8L2Q9H6S3 715 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 MVB12BQ9H7P6 319 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 LMBRD1Q9NUN5 540 aa12.93□□□□□ -0.34
COPS3-214ENST00000577246 NOVA2Q9UNW9 492 aaKnown RBP12.93□□□□□ -0.34
COPS3-214ENST00000577246 A0A1B0GTH6 734 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 C17orf113A0A1B0GUU1 675 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 C2orf81A6NN90 581 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 BTN3A1O00481 513 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 ZSCAN9O15535 394 aaPredicted RBP12.92□□□□□ -0.34
COPS3-214ENST00000577246 ZG16O60844 167 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 PTPN3P26045 913 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 HNRNPH3P31942 346 aaKnown RBP12.92□□□□□ -0.34
COPS3-214ENST00000577246 NR2C2P49116 596 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 CDC16Q13042 620 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 ZNF169Q14929 603 aaPredicted RBP12.92□□□□□ -0.34
COPS3-214ENST00000577246 SLC1A5Q15758 541 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 TLDC1Q6P9B6 456 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 FAM180AQ6UWF9 173 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 SLC25A41Q8N5S1 370 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 C19orf47Q8N9M1 422 aaKnown RBP12.92□□□□□ -0.34
COPS3-214ENST00000577246 DNAJB14Q8TBM8 379 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 GRHL3Q8TE85 626 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 DENND1AQ8TEH3 1009 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 TFB1MQ8WVM0 346 aaKnown RBP12.92□□□□□ -0.34
COPS3-214ENST00000577246 FAR1Q8WVX9 515 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 ULK4Q96C45 1275 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 BPIFA3Q9BQP9 254 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 FSD1LQ9BXM9 530 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 CHRNA10Q9GZZ6 450 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 ACTR10Q9NZ32 417 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 COPG2Q9UBF2 871 aa12.92□□□□□ -0.34
COPS3-214ENST00000577246 BTN3A3O00478 584 aa12.91□□□□□ -0.34
COPS3-214ENST00000577246 E2F3O00716 465 aa12.91□□□□□ -0.34
COPS3-214ENST00000577246 GAPDHSO14556 408 aaPredicted RBP12.91□□□□□ -0.34
COPS3-214ENST00000577246 SERPINC1P01008 464 aa12.91□□□□□ -0.34
COPS3-214ENST00000577246 STSP08842 583 aa12.91□□□□□ -0.34
COPS3-214ENST00000577246 CBSLP0DN79 551 aa12.91□□□□□ -0.34
COPS3-214ENST00000577246 GRNP28799 593 aaKnown RBP12.91□□□□□ -0.34
COPS3-214ENST00000577246 PTGER4P35408 488 aa12.91□□□□□ -0.34
COPS3-214ENST00000577246 CBSP35520 551 aa12.91□□□□□ -0.34
COPS3-214ENST00000577246 CD151P48509 253 aa12.91□□□□□ -0.34
COPS3-214ENST00000577246 PRLHRP49683 370 aa12.91□□□□□ -0.34
COPS3-214ENST00000577246 MPP3Q13368 585 aa12.91□□□□□ -0.34
COPS3-214ENST00000577246 ART3Q13508 389 aa12.91□□□□□ -0.34
COPS3-214ENST00000577246 NOMO1Q15155 1222 aa12.91□□□□□ -0.34
COPS3-214ENST00000577246 TLR1Q15399 786 aa12.91□□□□□ -0.34
COPS3-214ENST00000577246 NKAIN1Q4KMZ8 207 aa12.91□□□□□ -0.34
COPS3-214ENST00000577246 C1orf189Q5VU69 101 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms