RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 NRTNQ99748 197 aa15.74■□□□□ 0.11
CTDNEP1-211ENST00000575783 AP1M1Q9BXS5 423 aa15.74■□□□□ 0.11
CTDNEP1-211ENST00000575783 CBX8Q9HC52 389 aa15.74■□□□□ 0.11
CTDNEP1-211ENST00000575783 FANCLQ9NW38 375 aa15.74■□□□□ 0.11
CTDNEP1-211ENST00000575783 DHCR7Q9UBM7 475 aaKnown RBP15.74■□□□□ 0.11
CTDNEP1-211ENST00000575783 SH3BGRL2Q9UJC5 107 aa15.74■□□□□ 0.11
CTDNEP1-211ENST00000575783 ACSL5Q9ULC5 683 aa15.74■□□□□ 0.11
CTDNEP1-211ENST00000575783 AP1M2Q9Y6Q5 423 aa15.74■□□□□ 0.11
CTDNEP1-211ENST00000575783 PKDREJQ9NTG1 2253 aa15.74■□□□□ 0.11
CTDNEP1-211ENST00000575783 MGAT4DA6NG13 374 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 LGALS16A8MUM7 142 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 BTN3A3O00478 584 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 PCDH17O14917 1159 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 GZMAP12544 262 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 NDUFS1P28331 727 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 GJC1P36383 396 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 SLC10A2Q12908 348 aaPredicted RBP15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 DPYSL3Q14195 570 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 ASIC2Q16515 512 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 DEFB110Q30KQ9 67 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 NKAIN1Q4KMZ8 207 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 ATP13A4Q4VNC1 1196 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 GPRC6AQ5T6X5 926 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 RHBDD2Q6NTF9 364 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 TMEM207Q6UWW9 146 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 NT5DC3Q86UY8 548 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 KCTD6Q8NC69 237 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 ACVR1CQ8NER5 493 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 IMP4Q96G21 291 aaKnown RBP15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 PITPNM3Q9BZ71 974 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 HAUS4Q9H6D7 363 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 TXLNGQ9NUQ3 528 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 CDC23Q9UJX2 597 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 SVILO95425 2214 aa15.73■□□□□ 0.11
CTDNEP1-211ENST00000575783 PCNX1Q96RV3 2341 aa15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 BTN3A1O00481 513 aa15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 MYBL1P10243 752 aa15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 MSH3P20585 1137 aa15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 CAPN3P20807 821 aa15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 AKT1P31749 480 aa15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 LONRF2Q1L5Z9 754 aa15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 CT47A1Q5JQC4 288 aaPredicted RBP15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 MRPL14Q6P1L8 145 aaKnown RBP15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 ZNF571Q7Z3V5 609 aaPredicted RBP15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 HOOK3Q86VS8 718 aa15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 CFAP206Q8IYR0 622 aa15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 ZNF655Q8N720 491 aaPredicted RBP15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 DDHD1Q8NEL9 900 aa15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 SPATA22Q8NHS9 363 aa15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 FAM71BQ8TC56 605 aa15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 PROKR1Q8TCW9 393 aa15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 TRIM11Q96F44 468 aa15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 RMDN2Q96LZ7 410 aa15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 FERD3LQ96RJ6 166 aa15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 LHPPQ9H008 270 aa15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 FAM60AQ9NP50 221 aa15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 IRAK4Q9NWZ3 460 aa15.72■□□□□ 0.11
CTDNEP1-211ENST00000575783 SEC16AO15027 2179 aa15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 DDX3XO00571 662 aaKnown RBP eCLIP15.71■□□□□ 0.112e-11■■■■□ 21
CTDNEP1-211ENST00000575783 KCNN4O15554 427 aa15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 HCRTR1O43613 425 aa15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 UNC5CO95185 931 aa15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 NADKO95544 446 aaPredicted RBP15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 CTSBP07858 339 aa15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 HMGCLP35914 325 aa15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 SPAM1P38567 509 aa15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 ARSEP51690 589 aa15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 TDGF1P3P51864 188 aa15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 ZNF324BQ6AW86 544 aaPredicted RBP15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 RPUSD3Q6P087 351 aaKnown RBP15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 MTFR2Q6P444 385 aa15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 RPTNQ6XPR3 784 aa15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 LILRA3Q8N6C8 439 aaPredicted RBP15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 ANKRD20A12PQ8NF67 263 aa15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 OR2L2Q8NH16 312 aa15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 HDAC11Q96DB2 347 aa15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 THOC3Q96J01 351 aaKnown RBP15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 TAAR6Q96RI8 345 aa15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 ERGIC2Q96RQ1 377 aa15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 SRPK1Q96SB4 655 aaKnown RBP15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 IP6K2Q9UHH9 426 aa15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 HEBP2Q9Y5Z4 205 aa15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 ZGRF1Q86YA3 2104 aa15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 NAV3Q8IVL0 2385 aa15.71■□□□□ 0.11
CTDNEP1-211ENST00000575783 MYO7BQ6PIF6 2116 aa15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 GLYATL1P3A0A0U1RQE8 302 aa15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 C2orf74A8MZ97 194 aa15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 C19orf84I3L1E1 186 aa15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 BUD23O43709 281 aaKnown RBP15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 PMPCBO75439 489 aa15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 NDST3O95803 873 aa15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 ALAS2P22557 587 aa15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 MMP11P24347 488 aa15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 IFI35P80217 286 aaPredicted RBP15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 SRSF11Q05519 484 aaKnown RBP15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 AP1B1Q10567 949 aa15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 NOMO1Q15155 1222 aa15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 HADHQ16836 314 aaKnown RBP15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 XKRXQ6PP77 449 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms