RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 SLC2A4P14672 509 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 PAX7P23759 505 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 SLC7A1P30825 629 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 EMX2Q04743 252 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 GK3PQ14409 553 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 PTGR1Q14914 329 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 PDK3Q15120 406 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 UBE2R2Q712K3 238 aaPredicted RBP23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 AHI1Q8N157 1196 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 UBTD2Q8WUN7 234 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 RDH14Q9HBH5 336 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 TBC1D14Q9P2M4 693 aa23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 LEF1Q9UJU2 399 aaPredicted RBP23.18■■□□□ 1.3
NPLOC4-217ENST00000574897 TRANK1O15050 2925 aa23.17■■□□□ 1.3
NPLOC4-217ENST00000574897 ANKRD28O15084 1053 aa23.17■■□□□ 1.3
NPLOC4-217ENST00000574897 STK16O75716 305 aa23.17■■□□□ 1.3
NPLOC4-217ENST00000574897 FGF19O95750 216 aa23.17■■□□□ 1.3
NPLOC4-217ENST00000574897 CAPNS1P04632 268 aa23.17■■□□□ 1.3
NPLOC4-217ENST00000574897 HSD17B1P14061 328 aa23.17■■□□□ 1.3
NPLOC4-217ENST00000574897 POLR2LP62875 67 aaKnown RBP23.17■■□□□ 1.3
NPLOC4-217ENST00000574897 NRF1Q16656 503 aa23.17■■□□□ 1.3
NPLOC4-217ENST00000574897 KIAA0907Q7Z7F0 614 aaPredicted RBP23.17■■□□□ 1.3
NPLOC4-217ENST00000574897 TMEM126BQ8IUX1 230 aa23.17■■□□□ 1.3
NPLOC4-217ENST00000574897 TSPEARQ8WU66 669 aa23.17■■□□□ 1.3
NPLOC4-217ENST00000574897 PYCR2Q96C36 320 aa23.17■■□□□ 1.3
NPLOC4-217ENST00000574897 RSPRY1Q96DX4 576 aa23.17■■□□□ 1.3
NPLOC4-217ENST00000574897 PKD2L2Q9NZM6 624 aa23.17■■□□□ 1.3
NPLOC4-217ENST00000574897 HSPA8P11142 646 aaKnown RBP23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 ATP1B2P14415 290 aaPredicted RBP23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 TIMP2P16035 220 aa23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 NCK1P16333 377 aa23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 GSK3BP49841 420 aa23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 C6orf52Q5T4I8 152 aa23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 ZFP14Q9HCL3 533 aa23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 FADS2P1A8MWK0 482 aa23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 ARPC2O15144 300 aa23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 ANXA5P08758 320 aa23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 EPB42P16452 691 aa23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 SYN1P17600 705 aa23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 VIPR1P32241 457 aa23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 PRKG2Q13237 762 aa23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 BRAT1Q6PJG6 821 aa23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 C12orf76Q8N812 135 aaPredicted RBP23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 EME1Q96AY2 570 aa23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 ZNF707Q96C28 371 aaPredicted RBP23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 FAM83DQ9H4H8 585 aa23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 UBAP1Q9NZ09 502 aa23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 ZNF490Q9ULM2 529 aaPredicted RBP23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 ITM2BQ9Y287 266 aa23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 AP4B1Q9Y6B7 739 aa23.16■■□□□ 1.3
NPLOC4-217ENST00000574897 C2orf16Q68DN1 1984 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 OR2AG2A6NM03 316 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 SGTAO43765 313 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 CBSLP0DN79 551 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 PSMC3P17980 439 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 OXTRP30559 389 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 CBSP35520 551 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 METAP1P53582 386 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 DMC1Q14565 340 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 DHCR24Q15392 516 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 FOXB2Q5VYV0 432 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 NANOGP8Q6NSW7 305 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 ULK4Q96C45 1275 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 DUS3LQ96G46 650 aaKnown RBP23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 RIOK2Q9BVS4 552 aaKnown RBP23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 TRIM54Q9BYV2 358 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 ALG2Q9H553 416 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 COQ10BQ9H8M1 238 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 NANOGQ9H9S0 305 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 AURKCQ9UQB9 309 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 EME2A4GXA9 379 aaPredicted RBP23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 TMEM202A6NGA9 273 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 CYP17A1P05093 508 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 ZNF26P17031 533 aaPredicted RBP23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 LIPEQ05469 1076 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 CPSF6Q16630 551 aaKnown RBP eCLIP23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 UGT2A3Q6UWM9 527 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 NTMT1Q9BV86 223 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 PRKAG2Q9UGJ0 569 aa23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 NUP210Q8TEM1 1887 aaPredicted RBP23.15■■□□□ 1.3
NPLOC4-217ENST00000574897 XYLBO75191 536 aa23.14■■□□□ 1.3
NPLOC4-217ENST00000574897 VIPR2P41587 438 aa23.14■■□□□ 1.3
NPLOC4-217ENST00000574897 FOXM1Q08050 763 aa23.14■■□□□ 1.3
NPLOC4-217ENST00000574897 SELPLGQ14242 412 aa23.14■■□□□ 1.3
NPLOC4-217ENST00000574897 GBX1Q14549 363 aa23.14■■□□□ 1.3
NPLOC4-217ENST00000574897 RGL4Q8IZJ4 473 aa23.14■■□□□ 1.3
NPLOC4-217ENST00000574897 PPWD1Q96BP3 646 aaKnown RBP23.14■■□□□ 1.3
NPLOC4-217ENST00000574897 ZFYVE19Q96K21 471 aa23.14■■□□□ 1.3
NPLOC4-217ENST00000574897 PPM1MQ96MI6 270 aa23.14■■□□□ 1.3
NPLOC4-217ENST00000574897 CIB1Q99828 191 aa23.14■■□□□ 1.3
NPLOC4-217ENST00000574897 MRPS23Q9Y3D9 190 aaKnown RBP23.14■■□□□ 1.3
NPLOC4-217ENST00000574897 UPK3BL1B0FP48 263 aa23.14■■□□□ 1.29
NPLOC4-217ENST00000574897 UPK3BL2E5RIL1 263 aa23.14■■□□□ 1.29
NPLOC4-217ENST00000574897 MANBAO00462 879 aa23.14■■□□□ 1.29
NPLOC4-217ENST00000574897 TPST1O60507 370 aa23.14■■□□□ 1.29
NPLOC4-217ENST00000574897 STAMBPO95630 424 aa23.14■■□□□ 1.29
NPLOC4-217ENST00000574897 IRX1P78414 480 aaPredicted RBP23.14■■□□□ 1.29
NPLOC4-217ENST00000574897 CATSPER1Q8NEC5 780 aa23.14■■□□□ 1.29
NPLOC4-217ENST00000574897 ZUFSPQ96AP4 578 aa23.14■■□□□ 1.29
NPLOC4-217ENST00000574897 CNBD2Q96M20 576 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms