RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 IPPKQ9H8X2 491 aa27.84■■■□□ 2.05
CTDNEP1-210ENST00000574322 OPTCQ9UBM4 332 aa27.84■■■□□ 2.05
CTDNEP1-210ENST00000574322 BAIAP2L1Q9UHR4 511 aa27.84■■■□□ 2.05
CTDNEP1-210ENST00000574322 TIMM22Q9Y584 194 aa27.84■■■□□ 2.05
CTDNEP1-210ENST00000574322 ATP6AP2A0A1C7CYW4 349 aa27.83■■■□□ 2.05
CTDNEP1-210ENST00000574322 MEI4A8MW99 385 aa27.83■■■□□ 2.05
CTDNEP1-210ENST00000574322 ATP6AP2O75787 350 aa27.83■■■□□ 2.05
CTDNEP1-210ENST00000574322 ITGAXP20702 1163 aa27.83■■■□□ 2.05
CTDNEP1-210ENST00000574322 GPR1P46091 355 aa27.83■■■□□ 2.05
CTDNEP1-210ENST00000574322 AGERQ15109 404 aa27.83■■■□□ 2.05
CTDNEP1-210ENST00000574322 C2orf27AQ580R0 203 aa27.83■■■□□ 2.05
CTDNEP1-210ENST00000574322 AGBL4Q5VU57 503 aa27.83■■■□□ 2.05
CTDNEP1-210ENST00000574322 FAM219BQ5XKK7 198 aa27.83■■■□□ 2.05
CTDNEP1-210ENST00000574322 SCUBE1Q8IWY4 988 aa27.83■■■□□ 2.05
CTDNEP1-210ENST00000574322 AADATQ8N5Z0 425 aa27.83■■■□□ 2.05
CTDNEP1-210ENST00000574322 HMGCLL1Q8TB92 370 aa27.83■■■□□ 2.05
CTDNEP1-210ENST00000574322 MAGEC3Q8TD91 643 aa27.83■■■□□ 2.05
CTDNEP1-210ENST00000574322 NTMT1Q9BV86 223 aa27.83■■■□□ 2.05
CTDNEP1-210ENST00000574322 ARL15Q9NXU5 204 aa27.83■■■□□ 2.05
CTDNEP1-210ENST00000574322 POLG2Q9UHN1 485 aa27.83■■■□□ 2.05
CTDNEP1-210ENST00000574322 K7ESM1 405 aa27.82■■■□□ 2.04
CTDNEP1-210ENST00000574322 INPP4BO15327 924 aa27.82■■■□□ 2.04
CTDNEP1-210ENST00000574322 STK16O75716 305 aa27.82■■■□□ 2.04
CTDNEP1-210ENST00000574322 GSTM1P09488 218 aa27.82■■■□□ 2.04
CTDNEP1-210ENST00000574322 CD1EP15812 388 aa27.82■■■□□ 2.04
CTDNEP1-210ENST00000574322 LBPP18428 481 aa27.82■■■□□ 2.04
CTDNEP1-210ENST00000574322 MAPK9P45984 424 aa27.82■■■□□ 2.04
CTDNEP1-210ENST00000574322 MRPL19P49406 292 aaKnown RBP27.82■■■□□ 2.04
CTDNEP1-210ENST00000574322 GSTM4Q03013 218 aa27.82■■■□□ 2.04
CTDNEP1-210ENST00000574322 TDGQ13569 410 aa27.82■■■□□ 2.04
CTDNEP1-210ENST00000574322 MAPRE2Q15555 327 aa27.82■■■□□ 2.04
CTDNEP1-210ENST00000574322 TMEM220Q6QAJ8 160 aa27.82■■■□□ 2.04
CTDNEP1-210ENST00000574322 TRIM39Q9HCM9 518 aa27.82■■■□□ 2.04
CTDNEP1-210ENST00000574322 PSMD12O00232 456 aaPredicted RBP27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 MID1O15344 667 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 LILRB5O75023 590 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 ALDOCP09972 364 aaKnown RBP27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 HIST1H2AGP0C0S8 130 aaPredicted RBP27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 LINC00032P0C843 101 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 HIST1H2ADP20671 130 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 CYP2A7P20853 494 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 TAS2R38P59533 333 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 CUL3Q13618 768 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 RAET1GQ6H3X3 334 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 ADGRG6Q86SQ4 1221 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 ULK2Q8IYT8 1036 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 GJD3Q8N144 294 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 OR4F6Q8NGB9 312 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 ZNF514Q96K75 400 aaPredicted RBP27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 HIST1H2AHQ96KK5 128 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 HIST1H2AJQ99878 128 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 GABRG3Q99928 467 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 H2AFJQ9BTM1 129 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 THTPAQ9BU02 230 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 PTGDR2Q9Y5Y4 395 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 SEC23IPQ9Y6Y8 1000 aaKnown RBP27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 COL4A2P08572 1712 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 A0A088AWK7 358 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 CCNT2O60583 730 aaKnown RBP27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 PSIP1O75475 530 aaKnown RBP27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 CTHP32929 405 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 WASP42768 502 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 PGM2L1Q6PCE3 622 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 SPATA19Q7Z5L4 167 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 CDYL2Q8N8U2 506 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 MCOLN3Q8TDD5 553 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 FAM131CQ96AQ9 280 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 TMEM159Q96B96 161 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 LINC00615Q96LM1 132 aaPredicted RBP27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 SLC32A1Q9H598 525 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 FBRSQ9HAH7 460 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 BTRCQ9Y297 605 aa27.81■■■□□ 2.04
CTDNEP1-210ENST00000574322 TMEM202A6NGA9 273 aa27.8■■■□□ 2.04
CTDNEP1-210ENST00000574322 SYNCRIPO60506 623 aaKnown RBP27.8■■■□□ 2.04
CTDNEP1-210ENST00000574322 CCNG1P51959 295 aa27.8■■■□□ 2.04
CTDNEP1-210ENST00000574322 ZRSR2Q15696 482 aaKnown RBP27.8■■■□□ 2.04
CTDNEP1-210ENST00000574322 ADAMTSL4Q6UY14 1074 aa27.8■■■□□ 2.04
CTDNEP1-210ENST00000574322 LRRC70Q7Z2Q7 622 aa27.8■■■□□ 2.04
CTDNEP1-210ENST00000574322 KYQ8NBH2 561 aa27.8■■■□□ 2.04
CTDNEP1-210ENST00000574322 TUBGCP3Q96CW5 907 aa27.8■■■□□ 2.04
CTDNEP1-210ENST00000574322 VEGFDO43915 354 aa27.79■■■□□ 2.04
CTDNEP1-210ENST00000574322 EPB42P16452 691 aa27.79■■■□□ 2.04
CTDNEP1-210ENST00000574322 TIE1P35590 1138 aa27.79■■■□□ 2.04
CTDNEP1-210ENST00000574322 SLC6A12P48065 614 aa27.79■■■□□ 2.04
CTDNEP1-210ENST00000574322 GRIK2Q13002 908 aa27.79■■■□□ 2.04
CTDNEP1-210ENST00000574322 FASTKQ14296 549 aaKnown RBP27.79■■■□□ 2.04
CTDNEP1-210ENST00000574322 GSTA3Q16772 222 aa27.79■■■□□ 2.04
CTDNEP1-210ENST00000574322 ZNF776Q68DI1 518 aaPredicted RBP27.79■■■□□ 2.04
CTDNEP1-210ENST00000574322 MILR1Q7Z6M3 343 aa27.79■■■□□ 2.04
CTDNEP1-210ENST00000574322 SLC22A15Q8IZD6 547 aa27.79■■■□□ 2.04
CTDNEP1-210ENST00000574322 OR2T3Q8NH03 318 aa27.79■■■□□ 2.04
CTDNEP1-210ENST00000574322 METTL6Q8TCB7 284 aa27.79■■■□□ 2.04
CTDNEP1-210ENST00000574322 ATP6V1E2Q96A05 226 aa27.79■■■□□ 2.04
CTDNEP1-210ENST00000574322 COX14Q96I36 57 aa27.79■■■□□ 2.04
CTDNEP1-210ENST00000574322 NECAB3Q96P71 396 aaPredicted RBP27.79■■■□□ 2.04
CTDNEP1-210ENST00000574322 EFCAB1Q9HAE3 211 aa27.79■■■□□ 2.04
CTDNEP1-210ENST00000574322 RIC8BQ9NVN3 520 aa27.79■■■□□ 2.04
CTDNEP1-210ENST00000574322 NDE1Q9NXR1 346 aa27.79■■■□□ 2.04
CTDNEP1-210ENST00000574322 GPR34Q9UPC5 381 aa27.79■■■□□ 2.04
CTDNEP1-210ENST00000574322 ANGPTL3Q9Y5C1 460 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms