RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 TLCD1Q96CP7 247 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 CCDC138Q96M89 665 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 C1orf50Q9BV19 199 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 ARNT2Q9HBZ2 717 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 VCX3AQ9NNX9 186 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 MARK1Q9P0L2 795 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 TRPC4Q9UBN4 977 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 APOBEC3BQ9UH17 382 aaKnown RBP9.92□□□□□ -0.82
SMG6-213ENST00000573166 AURKCQ9UQB9 309 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 ENTPD4Q9Y227 616 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 DHRS7Q9Y394 339 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 ORC6Q9Y5N6 252 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 I6L893 689 aaPredicted RBP9.92□□□□□ -0.82
SMG6-213ENST00000573166 OR1F1O43749 312 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 TBX10O75333 385 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 ATP6V1G2O95670 118 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 COX7A2P14406 83 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 BDKRB1P46663 353 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 CLDN2P57739 230 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 PRKCQQ04759 706 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 ELOCQ15369 112 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 INAVAQ3KP66 663 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 TJAP1Q5JTD0 557 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 ARMC3Q5W041 872 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 DPPA4Q7L190 304 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 RRM2BQ7LG56 351 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 OR4E2Q8NGC2 313 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 DTX3LQ8TDB6 740 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 MARK4Q96L34 752 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 HSPA12BQ96MM6 686 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 HAO1Q9UJM8 370 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 ACSL5Q9ULC5 683 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 ZNF490Q9ULM2 529 aaPredicted RBP9.92□□□□□ -0.82
SMG6-213ENST00000573166 ZCWPW2A0A1B0GU75 182 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 PSMD11O00231 422 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 SLC28A1O00337 649 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 LDB2O43679 373 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 OR4F21O95013 312 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 CBSLP0DN79 551 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 CBSP35520 551 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 HPCAL1P37235 193 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 ANXA11P50995 505 aaKnown RBP9.92□□□□□ -0.82
SMG6-213ENST00000573166 ARHGDIAP52565 204 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 CYP2U1Q7Z449 544 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 ZNF614Q8N883 585 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 TMEM145Q8NBT3 493 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 SLC22A18Q96BI1 424 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 MIPEPQ99797 713 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 BOCQ9BWV1 1114 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 FOXQ1Q9C009 403 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 PCBD2Q9H0N5 130 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 FANCEQ9HB96 536 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 SSU72Q9NP77 194 aaKnown RBP9.92□□□□□ -0.82
SMG6-213ENST00000573166 K7EPI3 171 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 ERAL1O75616 437 aaKnown RBP9.91□□□□□ -0.82
SMG6-213ENST00000573166 OLFM2O95897 454 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 DCNP07585 359 aaKnown RBP9.91□□□□□ -0.82
SMG6-213ENST00000573166 P2RY2P41231 377 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 CDKN1CP49918 316 aaPredicted RBP9.91□□□□□ -0.82
SMG6-213ENST00000573166 ELF3P78545 371 aaPredicted RBP9.91□□□□□ -0.82
SMG6-213ENST00000573166 SPIDRQ14159 915 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 SEMA3AQ14563 771 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 CYP51A1Q16850 503 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 GRAMD1BQ3KR37 738 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 ACSBG2Q5FVE4 666 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 CLEC6AQ6EIG7 209 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 TMEM150AQ86TG1 271 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 CBARPQ8N350 705 aaPredicted RBP9.91□□□□□ -0.82
SMG6-213ENST00000573166 APOLD1Q96LR9 279 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 FAIM2Q9BWQ8 316 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 NDUFAF1Q9Y375 327 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 CFAP73A6NFT4 308 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 KERAO60938 352 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 MAOBP27338 520 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 CD6P30203 668 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 PTPRRQ15256 657 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 MED27Q6P2C8 311 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 ADIPOR2Q86V24 386 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 AVL9Q8NBF6 648 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 PIH1D2Q8WWB5 315 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 ARRDC3Q96B67 414 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 DKK3Q9UBP4 350 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 PIPSLA2A3N6 862 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 EDF1O60869 148 aaKnown RBP9.91□□□□□ -0.82
SMG6-213ENST00000573166 BMP10O95393 424 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 IFNA16P05015 189 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 CAPN1P07384 714 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 ZNF37AP17032 561 aaPredicted RBP9.91□□□□□ -0.82
SMG6-213ENST00000573166 ALAS2P22557 587 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 MAGEA6P43360 314 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 PGGT1BP53609 377 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 FRG1Q14331 258 aaKnown RBP9.91□□□□□ -0.82
SMG6-213ENST00000573166 SUZ12Q15022 739 aaKnown RBP9.91□□□□□ -0.82
SMG6-213ENST00000573166 HSF5Q4G112 596 aaPredicted RBP9.91□□□□□ -0.82
SMG6-213ENST00000573166 PLEKHS1Q5SXH7 462 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 STEAP4Q687X5 459 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 C12orf40Q86WS4 652 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 DCUN1D3Q8IWE4 304 aa9.91□□□□□ -0.82
SMG6-213ENST00000573166 PIANPQ8IYJ0 282 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms