RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 DPEP2Q9H4A9 486 aa13.05□□□□□ -0.32
CCDC40-205ENST00000571028 RMI1Q9H9A7 625 aa13.05□□□□□ -0.32
CCDC40-205ENST00000571028 IARS2Q9NSE4 1012 aaKnown RBP13.05□□□□□ -0.32
CCDC40-205ENST00000571028 KLC4Q9NSK0 619 aa13.05□□□□□ -0.32
CCDC40-205ENST00000571028 LRIT1Q9P2V4 623 aa13.05□□□□□ -0.32
CCDC40-205ENST00000571028 SLC23A2Q9UGH3 650 aa13.05□□□□□ -0.32
CCDC40-205ENST00000571028 FAM169AQ9Y6X4 670 aa13.05□□□□□ -0.32
CCDC40-205ENST00000571028 SCN8AQ9UQD0 1980 aa13.05□□□□□ -0.32
CCDC40-205ENST00000571028 TRBV5-4A0A0C4DH59 114 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 UBA6A0AVT1 1052 aaPredicted RBP13.04□□□□□ -0.32
CCDC40-205ENST00000571028 B4DGG1 531 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 KMOO15229 486 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 CAPN5O15484 640 aaPredicted RBP13.04□□□□□ -0.32
CCDC40-205ENST00000571028 POP7O75817 140 aaKnown RBP13.04□□□□□ -0.32
CCDC40-205ENST00000571028 ERVK-10P10266 1014 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 PRKAR1AP10644 381 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 ATP1B2P14415 290 aaPredicted RBP13.04□□□□□ -0.32
CCDC40-205ENST00000571028 PNLIPP16233 465 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 ZNF7P17097 686 aaPredicted RBP13.04□□□□□ -0.32
CCDC40-205ENST00000571028 PPARGP37231 505 aaPredicted RBP13.04□□□□□ -0.32
CCDC40-205ENST00000571028 ARCN1P48444 511 aaKnown RBP13.04□□□□□ -0.32
CCDC40-205ENST00000571028 CARSP49589 748 aaKnown RBP13.04□□□□□ -0.32
CCDC40-205ENST00000571028 DRG2P55039 364 aaKnown RBP13.04□□□□□ -0.32
CCDC40-205ENST00000571028 BIRC2Q13490 618 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 CRYMQ14894 314 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 C16orf72Q14CZ0 275 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 SEPT7Q16181 437 aaKnown RBP13.04□□□□□ -0.32
CCDC40-205ENST00000571028 AMZ1Q400G9 498 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 LACTB2Q53H82 288 aaPredicted RBP13.04□□□□□ -0.32
CCDC40-205ENST00000571028 AARS2Q5JTZ9 985 aaKnown RBP13.04□□□□□ -0.32
CCDC40-205ENST00000571028 SPANXN3Q5MJ09 141 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 LYPLAL1Q5VWZ2 237 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 MRNIPQ6NTE8 343 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 NEPROQ6NW34 567 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 UNC5AQ6ZN44 842 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 SDCCAG8Q86SQ7 713 aaPredicted RBP13.04□□□□□ -0.32
CCDC40-205ENST00000571028 TMEM135Q86UB9 458 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 KCNMB4Q86W47 210 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 NRROSQ86YC3 692 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 ZNF547Q8IVP9 402 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 SLITRK4Q8IW52 837 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 SFTPA2Q8IWL1 248 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 PALM2Q8IXS6 379 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 IFT20Q8IY31 132 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 CACNA2D3Q8IZS8 1091 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 GPR156Q8NFN8 814 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 KIAA1143Q96AT1 154 aaPredicted RBP13.04□□□□□ -0.32
CCDC40-205ENST00000571028 SCARF2Q96GP6 870 aaPredicted RBP13.04□□□□□ -0.32
CCDC40-205ENST00000571028 C9orf72Q96LT7 481 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 TAAR9Q96RI9 348 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 SEMA6CQ9H3T2 930 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 TRNAU1APQ9NX07 287 aaKnown RBP13.04□□□□□ -0.32
CCDC40-205ENST00000571028 TEX264Q9Y6I9 313 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 PRSS21Q9Y6M0 314 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 RP1P56715 2156 aa13.04□□□□□ -0.32
CCDC40-205ENST00000571028 AGAP14A8MT82 685 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 CHUKO15111 745 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 SLU7O95391 586 aaKnown RBP13.03□□□□□ -0.32
CCDC40-205ENST00000571028 CPNE6O95741 557 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 TTC4O95801 387 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 CCL4P13236 92 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 FMO4P31512 558 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 EIF3BP55884 814 aaKnown RBP13.03□□□□□ -0.32
CCDC40-205ENST00000571028 CTBP1Q13363 440 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 BRD3Q15059 726 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 C14orf28Q4W4Y0 310 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 HSP90AA5PQ58FG0 334 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 ZNF470Q6ECI4 717 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 CERS6Q6ZMG9 384 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 DENND6AQ8IWF6 608 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 HEXDCQ8WVB3 486 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 MIB2Q96AX9 1013 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 LRRC39Q96DD0 335 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 NAT9Q9BTE0 207 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 ZMYND15Q9H091 742 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 GPN2Q9H9Y4 310 aaPredicted RBP13.03□□□□□ -0.32
CCDC40-205ENST00000571028 RDH14Q9HBH5 336 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 FBXO6Q9NRD1 293 aaPredicted RBP13.03□□□□□ -0.32
CCDC40-205ENST00000571028 ZDHHC18Q9NUE0 388 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 SPATS2LQ9NUQ6 558 aaKnown RBP13.03□□□□□ -0.32
CCDC40-205ENST00000571028 TAAR2Q9P1P5 351 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 MTRF1LQ9UGC7 380 aaKnown RBP13.03□□□□□ -0.32
CCDC40-205ENST00000571028 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.03□□□□□ -0.32
CCDC40-205ENST00000571028 ST14Q9Y5Y6 855 aa13.03□□□□□ -0.32
CCDC40-205ENST00000571028 V9GYY5 206 aaPredicted RBP13.03□□□□□ -0.32
CCDC40-205ENST00000571028 UTP20O75691 2785 aaKnown RBP13.02□□□□□ -0.32
CCDC40-205ENST00000571028 PRR19A6NJB7 356 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 IQCF5A8MTL0 148 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 E7ESA3 106 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 HGSO14964 777 aaPredicted RBP13.02□□□□□ -0.33
CCDC40-205ENST00000571028 NUDT21O43809 227 aaKnown RBP13.02□□□□□ -0.33
CCDC40-205ENST00000571028 VPS4BO75351 444 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 SSTR1P30872 391 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 NSG1P42857 185 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 MAGEA4P43358 317 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 TTPAP49638 278 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 MPP1Q00013 466 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 KLRB1Q12918 225 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 ITIH4Q14624 930 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 FHL5Q5TD97 284 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms