RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 TMTC4Q5T4D3 741 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 TSTD2Q5T7W7 516 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 PWWP2BQ6NUJ5 590 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 CLDN19Q8N6F1 224 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 DNAAF3Q8N9W5 541 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 SEC14L1Q92503 715 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 ZNF501Q96CX3 271 aaPredicted RBP16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 SRMSQ9H3Y6 488 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 FAM8A1Q9UBU6 413 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 LNPEPQ9UIQ6 1025 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 CROTQ9UKG9 612 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 SNRNP200O75643 2136 aaKnown RBP16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 CCDC162PA2VCL2 907 aa16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 F8W8V4 182 aa16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 SUV39H1O43463 412 aa16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 IFNB1P01574 187 aa16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 CCDC175P0C221 793 aa16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 PRSS56P0CW18 603 aa16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 ACADLP28330 430 aa16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 PDHA2P29803 388 aa16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 ARL4DP49703 201 aa16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 NFATC3Q12968 1075 aa16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 AFTPHQ6ULP2 937 aa16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 OR4E2Q8NGC2 313 aa16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 APOBEC4Q8WW27 367 aaKnown RBP16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 MAIP1Q8WWC4 291 aa16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 C1orf54Q8WWF1 131 aa16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 LCN9Q8WX39 176 aa16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 TFGQ92734 400 aaPredicted RBP16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 TTC1Q99614 292 aa16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 GPR87Q9BY21 358 aa16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 CHRNA10Q9GZZ6 450 aa16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 PIH1D1Q9NWS0 290 aaKnown RBP16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 PCDHB3Q9Y5E6 796 aa16.6■□□□□ 0.25
MAP1LC3B-208ENST00000570189 SLC5A10A0PJK1 596 aa16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 AP3B1O00203 1094 aa16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 CPNE3O75131 537 aaKnown RBP16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 OR56A5P0C7T3 313 aa16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 POLR2CP19387 275 aaPredicted RBP16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 KRT33BQ14525 404 aa16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 KCNAB1Q14722 419 aa16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 CCDC38Q502W7 563 aa16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 ARMC3Q5W041 872 aa16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 PPP1R21Q6ZMI0 780 aa16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 TBC1D21Q8IYX1 336 aa16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 CCDC89Q8N998 374 aa16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 TRIM58Q8NG06 486 aa16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 OR52E1Q8NGJ3 308 aa16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 FERD3LQ96RJ6 166 aa16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 ASH1LQ9NR48 2969 aaKnown RBP16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 RAB6BQ9NRW1 208 aa16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 KCND1Q9NSA2 647 aa16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 SMARCAL1Q9NZC9 954 aa16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 POLG2Q9UHN1 485 aa16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 TCAF1Q9Y4C2 921 aa16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 PRSS21Q9Y6M0 314 aa16.59■□□□□ 0.25
MAP1LC3B-208ENST00000570189 MYO18BQ8IUG5 2567 aa16.58■□□□□ 0.25
MAP1LC3B-208ENST00000570189 E7EVH7 732 aa16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 BTN3A3O00478 584 aa16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 BTN3A1O00481 513 aa16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 SLC28A2O43868 658 aa16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 CREG1O75629 220 aa16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 PRDX3P30048 256 aaKnown RBP16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 PPARGP37231 505 aaPredicted RBP16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 GRIA1P42261 906 aa16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 PREPP48147 710 aa16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 DNASE1L3Q13609 305 aa16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 ZNF534Q76KX8 674 aa16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 AMIGO1Q86WK6 493 aa16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 LRRC8AQ8IWT6 810 aa16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 ADGRF3Q8IZF5 1079 aa16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 GLIS1Q8NBF1 620 aa16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 OR4L1Q8NH43 312 aa16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 HDAC10Q969S8 669 aa16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 ELMO2Q96JJ3 720 aa16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 TLR10Q9BXR5 811 aa16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 HEMK1Q9Y5R4 338 aaPredicted RBP16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 MRPS18BQ9Y676 258 aaKnown RBP16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 KCNMB2Q9Y691 235 aa16.58■□□□□ 0.24
MAP1LC3B-208ENST00000570189 OR51F1A6NGY5 319 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 C2orf74A8MZ97 194 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 GOT2P00505 430 aaKnown RBP16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 APRTP07741 180 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 PRKAR1AP10644 381 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 ETS1P14921 441 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 CDH3P22223 829 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 SHMT2P34897 504 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 RPL22P35268 128 aaKnown RBP16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 LMAN1P49257 510 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 AARS2Q5JTZ9 985 aaKnown RBP16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 IZUMO3Q5VZ72 239 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 ATG14Q6ZNE5 492 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 MICALCLQ6ZW33 695 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 TAB3Q8N5C8 712 aaPredicted RBP16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 OR5K2Q8NHB8 316 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 CT55Q8WUE5 264 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 ELMO1Q92556 727 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 ZNF778Q96MU6 729 aa16.57■□□□□ 0.24
MAP1LC3B-208ENST00000570189 CARD6Q9BX69 1037 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms