RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 GRXCR1A8MXD5 290 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 I3L4J1 428 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 MDM4O15151 490 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 BCAT2O15382 392 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-222ENST00000570139 LAMTOR5O43504 91 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 TMPRSS11DO60235 418 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 PRPSAP2O60256 369 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 ATP2C2O75185 946 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 LRCH4O75427 683 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 TJP3O95049 919 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 ZFPL1O95159 310 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 GJB5O95377 273 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 C1RP00736 705 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 FGGP02679 453 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 URODP06132 367 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 CREB1P16220 341 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 GKP32189 559 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 CHRNA3P32297 505 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 CXCR5P32302 372 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 SSR1P43307 286 aaKnown RBP7.11□□□□□ -1.27
CNOT1-222ENST00000570139 CPA2P48052 419 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 FNTAP49354 379 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 GLUD2P49448 558 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 RGS7P49802 495 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 TKTL1P51854 596 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 MVDP53602 400 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 MAP3K7CLP57077 242 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 DAOAP59103 153 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 RPL10AP62906 217 aaKnown RBP7.11□□□□□ -1.27
CNOT1-222ENST00000570139 EIF2B5Q13144 721 aaKnown RBP7.11□□□□□ -1.27
CNOT1-222ENST00000570139 DHX34Q14147 1143 aaKnown RBP7.11□□□□□ -1.27
CNOT1-222ENST00000570139 SMC1AQ14683 1233 aaKnown RBP7.11□□□□□ -1.27
CNOT1-222ENST00000570139 PDK2Q15119 407 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 SLC25A52Q3SY17 297 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 SLC39A12Q504Y0 691 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 C2CD6Q53TS8 623 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 ZNF648Q5T619 568 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-222ENST00000570139 TPGS2Q68CL5 300 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 PM20D1Q6GTS8 502 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 SLC8B1Q6J4K2 584 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 C8orf74Q6P047 294 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 KIAA1324Q6UXG2 1013 aaKnown RBP7.11□□□□□ -1.27
CNOT1-222ENST00000570139 SLC39A11Q8N1S5 342 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 PNPLA1Q8N8W4 532 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 TP53I13Q8NBR0 393 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-222ENST00000570139 OR10T2Q8NGX3 314 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 CCDC26Q8TAB7 109 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 NCSTNQ92542 709 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 CNOT9Q92600 299 aaKnown RBP7.11□□□□□ -1.27
CNOT1-222ENST00000570139 ARHGEF2Q92974 986 aaKnown RBP7.11□□□□□ -1.27
CNOT1-222ENST00000570139 PGAP3Q96FM1 320 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-222ENST00000570139 CDK5RAP1Q96SZ6 601 aaKnown RBP7.11□□□□□ -1.27
CNOT1-222ENST00000570139 NPLQ9BXD5 320 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-222ENST00000570139 RABEP2Q9H5N1 569 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 EPHX3Q9H6B9 360 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 TLR8Q9NR97 1041 aaKnown RBP7.11□□□□□ -1.27
CNOT1-222ENST00000570139 PCDHB16Q9NRJ7 776 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 SPG21Q9NZD8 308 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 TRPM5Q9NZQ8 1165 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 RCOR3Q9P2K3 495 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-222ENST00000570139 CACNG4Q9UBN1 327 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 SH2B3Q9UQQ2 575 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 PTPRSQ13332 1948 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 MYO16Q9Y6X6 1858 aa7.11□□□□□ -1.27
CNOT1-222ENST00000570139 TET1Q8NFU7 2136 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 GAGE12BA1L429 117 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 GAGE12HA6NDE8 117 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 NDC80O14777 642 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 CAPN9O14815 690 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 SPRY2O43597 315 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 HCRTO43612 131 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 PMPCBO75439 489 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 ERLIN1O75477 346 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 HSPA4LO95757 839 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 ONECUT2O95948 504 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 KRT1P04264 644 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 EIF2S1P05198 315 aaKnown RBP7.1□□□□□ -1.27
CNOT1-222ENST00000570139 PPP3CBP16298 524 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 GATA3P23771 443 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 GCH1P30793 250 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 RDXP35241 583 aaKnown RBP7.1□□□□□ -1.27
CNOT1-222ENST00000570139 HNF1BP35680 557 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 TUFMP49411 452 aaKnown RBP7.1□□□□□ -1.27
CNOT1-222ENST00000570139 DNA2P51530 1060 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 DEFB103AP81534 67 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 ARHGAP8P85298 464 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 EFNB1P98172 346 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 SLC25A11Q02978 314 aaKnown RBP7.1□□□□□ -1.27
CNOT1-222ENST00000570139 PSMD5Q16401 504 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 TFDP3Q5H9I0 405 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 TEX35Q5T0J7 233 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 CDC73Q6P1J9 531 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 RTL10Q7L3V2 364 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 TADA2BQ86TJ2 420 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 SLC13A5Q86YT5 568 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-222ENST00000570139 CCDC50Q8IVM0 306 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 NUP93Q8N1F7 819 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 EIF1ADQ8N9N8 165 aaKnown RBP7.1□□□□□ -1.27
CNOT1-222ENST00000570139 COLGALT1Q8NBJ5 622 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 ADPRHL1Q8NDY3 354 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms