RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 TUBB2AQ13885 445 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 PRPSAP1Q14558 356 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 PARP6Q2NL67 630 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 LACTB2Q53H82 288 aaPredicted RBP13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 KLHL35Q6PF15 583 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 NAPRTQ6XQN6 538 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 UBL4BQ8N7F7 174 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 OR1L3Q8NH93 324 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 ZFPM2Q8WW38 1151 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 ULK4Q96C45 1275 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 DCUN1D1Q96GG9 259 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 CDKN2AIPNLQ96HQ2 116 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 FCRL4Q96PJ5 515 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 C19orf43Q9BQ61 176 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 TUBB2BQ9BVA1 445 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 PITPNM3Q9BZ71 974 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 TWSG1Q9GZX9 223 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 CHST8Q9H2A9 424 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 XKR8Q9H6D3 395 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 AMFRQ9UKV5 643 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 POLHQ9Y253 713 aa13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 RP1L1Q8IWN7 2480 aaPredicted RBP13.45□□□□□ -0.26
GTF3C1-211ENST00000569653 C17orf113A0A1B0GUU1 675 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 PIPSLA2A3N6 862 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 CLEC18AA5D8T8 446 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 MIF4GDA9UHW6 222 aaKnown RBP13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 NRDCO43847 1150 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 SCRG1O75711 98 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 STK10O94804 968 aaKnown RBP13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 ZBTB11O95625 1053 aaPredicted RBP13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 CAPN1P07384 714 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 CTSBP07858 339 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 FOXN2P32314 431 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 RORAP35398 523 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 GRIA1P42261 906 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 BOP1Q14137 746 aaKnown RBP13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 SEPT6Q14141 434 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 KCTD19Q17RG1 926 aaPredicted RBP13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 GPR33Q49SQ1 333 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 CCDC38Q502W7 563 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 ZRANB3Q5FWF4 1079 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 PLEKHS1Q5SXH7 462 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 CLEC18BQ6UXF7 455 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 ARHGEF18Q6ZSZ5 1173 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 PEX26Q7Z412 305 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 TMEM151BQ8IW70 566 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 ADGRF3Q8IZF5 1079 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 RNF10Q8N5U6 811 aaKnown RBP13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 GLIS1Q8NBF1 620 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 CLEC18CQ8NCF0 446 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 ACVR1CQ8NER5 493 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 OR52E1Q8NGJ3 308 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 FLVCR1-AS1Q8TAF5 88 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 ADAMTS17Q8TE56 1095 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 HES6Q96HZ4 224 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 CCM2Q9BSQ5 444 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 HGH1Q9BTY7 390 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 ICKQ9UPZ9 632 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 PLAAQ9Y263 795 aa13.44□□□□□ -0.26
GTF3C1-211ENST00000569653 CCDC162PA2VCL2 907 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 KLHL33A6NCF5 533 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 C21orf140B9A014 251 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 KRT86O43790 486 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 CPNE3O75131 537 aaKnown RBP13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 AP2A1O95782 977 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 CCNYL3P0C7X3 344 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 PTPN4P29074 926 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 PRDX3P30048 256 aaKnown RBP13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 HADHAP40939 763 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 LMAN1P49257 510 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 PRKG2Q13237 762 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 SEMA5AQ13591 1074 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 OASLQ15646 514 aaKnown RBP13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 ZIC1Q15915 447 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 UGT8Q16880 541 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 FAM198BQ6UWH4 519 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 TRIM73Q86UV7 250 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 TMEM126BQ8IUX1 230 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 APLFQ8IW19 511 aaPredicted RBP13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 OR52K1Q8NGK4 314 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 OR5AR1Q8NGP9 310 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 OR13J1Q8NGT2 312 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 LCN9Q8WX39 176 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 ZNF778Q96MU6 729 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 TRAPPC9Q96Q05 1148 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 FERD3LQ96RJ6 166 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 FERMT1Q9BQL6 677 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 LRRC40Q9H9A6 602 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 FAM60AQ9NP50 221 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 KCND1Q9NSA2 647 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 SPHK1Q9NYA1 384 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 SLC2A6Q9UGQ3 507 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 FEZ2Q9UHY8 353 aaPredicted RBP13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 ANAPC2Q9UJX6 822 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 KCND3Q9UK17 655 aa13.43□□□□□ -0.26
GTF3C1-211ENST00000569653 GSAPA4D1B5 854 aa13.42□□□□□ -0.26
GTF3C1-211ENST00000569653 BHMG1C9JSJ3 638 aaPredicted RBP13.42□□□□□ -0.26
GTF3C1-211ENST00000569653 CFAP99D6REC4 459 aa13.42□□□□□ -0.26
GTF3C1-211ENST00000569653 H3BMH7 237 aa13.42□□□□□ -0.26
GTF3C1-211ENST00000569653 OR1I1O60431 355 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms