RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 ARSFP54793 590 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 KRTAP10-9P60411 292 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 AP2B1P63010 937 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 GALNT2Q10471 571 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 KRT81Q14533 505 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 LONRF1Q17RB8 773 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 SLC5A12Q1EHB4 618 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 TUBB8Q3ZCM7 444 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 TCP11X2Q5H9J9 407 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 CT47A1Q5JQC4 288 aaPredicted RBP8.38□□□□□ -1.07
SMG1-216ENST00000569122 C1orf189Q5VU69 101 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 ZNF449Q6P9G9 518 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 FBXO38Q6PIJ6 1188 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 TMEM220Q6QAJ8 160 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 CYP4V2Q6ZWL3 525 aaPredicted RBP8.38□□□□□ -1.07
SMG1-216ENST00000569122 CCDC110Q8TBZ0 833 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 HSPH1Q92598 858 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 HAS2Q92819 552 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 EID2BQ96D98 161 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 TRIM11Q96F44 468 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 THOC3Q96J01 351 aaKnown RBP8.38□□□□□ -1.07
SMG1-216ENST00000569122 INSM2Q96T92 566 aaPredicted RBP8.38□□□□□ -1.07
SMG1-216ENST00000569122 ENKD1Q9H0I2 346 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 TRABDQ9H4I3 376 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 CBX8Q9HC52 389 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 SEMA3GQ9NS98 782 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 IRAK4Q9NWZ3 460 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 DTLQ9NZJ0 730 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 IL1RAPL1Q9NZN1 696 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 SHOC2Q9UQ13 582 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 MRPS2Q9Y399 296 aaKnown RBP8.38□□□□□ -1.07
SMG1-216ENST00000569122 CFAP20Q9Y6A4 193 aaKnown RBP8.38□□□□□ -1.07
SMG1-216ENST00000569122 PKDREJQ9NTG1 2253 aa8.38□□□□□ -1.07
SMG1-216ENST00000569122 DNHD1Q96M86 4753 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 DCHS2Q6V1P9 2916 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 SLC19A2O60779 497 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 MSH3P20585 1137 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 HMGCLP35914 325 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 KIR3DL1P43629 444 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 CARSP49589 748 aaKnown RBP8.37□□□□□ -1.07
SMG1-216ENST00000569122 NIPAL4Q0D2K0 466 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 ITGA9Q13797 1035 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 PIGHQ14442 188 aaPredicted RBP8.37□□□□□ -1.07
SMG1-216ENST00000569122 BECN1Q14457 450 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 NFE2L1Q14494 772 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 ATP13A5Q4VNC0 1218 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 KRTCAP3Q53RY4 240 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 CCDC183Q5T5S1 534 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 DUS1LQ6P1R4 473 aaKnown RBP8.37□□□□□ -1.07
SMG1-216ENST00000569122 SARM1Q6SZW1 724 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 LINC00696Q6ZRV3 163 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 CDHR3Q6ZTQ4 885 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 OVCH1Q7RTY7 1134 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 TGIF2LYQ8IUE0 185 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 KBTBD2Q8IY47 623 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 CATSPER1Q8NEC5 780 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 NEK11Q8NG66 645 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 OR2L2Q8NH16 312 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 ZNF653Q96CK0 615 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 MAGED4Q96JG8 741 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 ZNF830Q96NB3 372 aaPredicted RBP8.37□□□□□ -1.07
SMG1-216ENST00000569122 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.37□□□□□ -1.074e-6■□□□□ 8.5
SMG1-216ENST00000569122 WWP1Q9H0M0 922 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 TFB2MQ9H5Q4 396 aaKnown RBP8.37□□□□□ -1.07
SMG1-216ENST00000569122 PLSCR2Q9NRY7 297 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 CDYLQ9Y232 598 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 ZNF711Q9Y462 761 aa8.37□□□□□ -1.07
SMG1-216ENST00000569122 C17orf113A0A1B0GUU1 675 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 CCDC78A2IDD5 438 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 TMEM200CA6NKL6 621 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 IFRD1O00458 451 aaPredicted RBP8.36□□□□□ -1.07
SMG1-216ENST00000569122 DDX3YO15523 660 aaKnown RBP8.36□□□□□ -1.07
SMG1-216ENST00000569122 ONECUT2O95948 504 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 HPP00738 406 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 SLC4A1P02730 911 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 HLA-DQB2P05538 268 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 UQCRHP07919 91 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 MYBL1P10243 752 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 RARAP10276 462 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 FERP16591 822 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 ALAS2P22557 587 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 TNFSF10P50591 281 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 CSNK1G2P78368 415 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 Q0VFX4 171 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 IHHQ14623 411 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 PAFAH1B3Q15102 231 aaKnown RBP8.36□□□□□ -1.07
SMG1-216ENST00000569122 SLC14A2Q15849 920 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 PPP2R5EQ16537 467 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 RBBP7Q16576 425 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 KHDC1Q4VXA5 237 aaKnown RBP8.36□□□□□ -1.07
SMG1-216ENST00000569122 YOD1Q5VVQ6 348 aaPredicted RBP8.36□□□□□ -1.07
SMG1-216ENST00000569122 KIRREL2Q6UWL6 708 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 MEX3BQ6ZN04 569 aaKnown RBP8.36□□□□□ -1.07
SMG1-216ENST00000569122 FAM83HQ6ZRV2 1179 aaPredicted RBP8.36□□□□□ -1.07
SMG1-216ENST00000569122 TAOK1Q7L7X3 1001 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 NT5DC3Q86UY8 548 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 AMIGO1Q86WK6 493 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 MAP7D3Q8IWC1 876 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 RASGEF1AQ8N9B8 481 aa8.36□□□□□ -1.07
SMG1-216ENST00000569122 C19orf47Q8N9M1 422 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms