RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	GOLGA6L10	A6NI86	522 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	SMIM23	A6NLE4	172 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	PHGDH	O43175	533 aa	Known RBP	11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	KDM1A	O60341	852 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	MPO	P05164	745 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	SLC35E2B	P0CK96	405 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	MTHFD1	P11586	935 aa	Known RBP	11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	BRAF	P15056	766 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	KRT15	P19012	456 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	CCNF	P41002	786 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	ID4	P47928	161 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	FASLG	P48023	281 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	CSRP3	P50461	194 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	ATP6V0D1	P61421	351 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	BIRC2	Q13490	618 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	C14orf28	Q4W4Y0	310 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	CEP85L	Q5SZL2	805 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	IYD	Q6PHW0	289 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	NAPRT	Q6XQN6	538 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	CMC1	Q7Z7K0	106 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	SLC9B2	Q86UD5	537 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	C17orf82	Q86X59	251 aa	Predicted RBP	11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	CEP97	Q8IW35	865 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	TRIM48	Q8IWZ4	208 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	NAGS	Q8N159	534 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	GPR156	Q8NFN8	814 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	SKA2	Q8WVK7	121 aa	Predicted RBP	11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	ZFPM2	Q8WW38	1151 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	TFG	Q92734	400 aa	Predicted RBP	11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	CXorf40B	Q96DE9	158 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	C12orf66	Q96MD2	445 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	SLC30A3	Q99726	388 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	DERL2	Q9GZP9	239 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	STMN4	Q9H169	189 aa	Predicted RBP	11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	TRIT1	Q9H3H1	467 aa	Known RBP	11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	MVB12B	Q9H7P6	319 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	RXFP3	Q9NSD7	469 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	GALP	Q9UBC7	116 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	CTNNAL1	Q9UBT7	734 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	TBK1	Q9UHD2	729 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	ACOT9	Q9Y305	439 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	DMXL1	Q9Y485	3027 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	COLEC10	Q9Y6Z7	277 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	LAMA1	P25391	3075 aa		11.73	□□□□□ -0.53
FANCA-231	ENST00000568626	TLDC2	A0PJX2	215 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	PABPN1L	A6NDY0	278 aa	Known RBP	11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	C4orf47	A7E2U8	309 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	TRIM38	O00635	465 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	SLC16A5	O15375	505 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	NOBOX	O60393	691 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	MATN4	O95460	622 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	EML2	O95834	649 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	TSPAN12	O95859	305 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	CAT	P04040	527 aa	Known RBP	11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	C2	P06681	752 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	C8G	P07360	202 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	COL6A2	P12110	1019 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	XRCC1	P18887	633 aa	Predicted RBP	11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	ACADL	P28330	430 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	PDHA2	P29803	388 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	DUSP3	P51452	185 aa	Predicted RBP	11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	KPNA2	P52292	529 aa	Known RBP	11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	UBE2I	P63279	158 aa	Known RBP	11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	ZNF460	Q14592	562 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	CLCA4	Q14CN2	919 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	NR0B2	Q15466	257 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	RPE65	Q16518	533 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	STPG1	Q5TH74	334 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	TTC23L	Q6PF05	361 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	ADAMTSL2	Q86TH1	951 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	VRK3	Q8IV63	474 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	NAXD	Q8IW45	347 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	DCUN1D3	Q8IWE4	304 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	KIAA2013	Q8IYS2	634 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	EID2	Q8N6I1	236 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	KY	Q8NBH2	561 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	MAGEC3	Q8TD91	643 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	NETO1	Q8TDF5	533 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	SLC37A2	Q8TED4	501 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	SETD7	Q8WTS6	366 aa	Known RBP	11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	MZB1	Q8WU39	189 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	NAT6	Q93015	286 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	SH3KBP1	Q96B97	665 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	UBXN10	Q96LJ8	280 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	TSNARE1	Q96NA8	513 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	INSM2	Q96T92	566 aa	Predicted RBP	11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	ACBD3	Q9H3P7	528 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	CAAP1	Q9H8G2	361 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	UCK1	Q9HA47	277 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	IMP3	Q9NV31	184 aa	Known RBP	11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	SENP1	Q9P0U3	644 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	SIRPG	Q9P1W8	387 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	CPNE7	Q9UBL6	633 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	POLG2	Q9UHN1	485 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	PSMD13	Q9UNM6	376 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	ASF1A	Q9Y294	204 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	WDR37	Q9Y2I8	494 aa		11.72	□□□□□ -0.53
FANCA-231	ENST00000568626	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	11.71	□□□□□ -0.53
FANCA-231	ENST00000568626	OR52A4P	A6NMU1	304 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms