RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-223ENST00000568566 OR2M4Q96R27 311 aa8.2□□□□□ -1.1
TSC2-223ENST00000568566 SRPK1Q96SB4 655 aaKnown RBP8.2□□□□□ -1.1
TSC2-223ENST00000568566 SLC30A3Q99726 388 aa8.2□□□□□ -1.1
TSC2-223ENST00000568566 ZSCAN5AQ9BUG6 496 aa8.2□□□□□ -1.1
TSC2-223ENST00000568566 LRRC4CQ9HCJ2 640 aa8.2□□□□□ -1.1
TSC2-223ENST00000568566 XAB2Q9HCS7 855 aaKnown RBP8.2□□□□□ -1.1
TSC2-223ENST00000568566 PRDM8Q9NQV8 689 aa8.2□□□□□ -1.1
TSC2-223ENST00000568566 FBXO6Q9NRD1 293 aaPredicted RBP8.2□□□□□ -1.1
TSC2-223ENST00000568566 KLC4Q9NSK0 619 aa8.2□□□□□ -1.1
TSC2-223ENST00000568566 TBC1D29Q9UFV1 150 aa8.2□□□□□ -1.1
TSC2-223ENST00000568566 CRLS1Q9UJA2 301 aa8.2□□□□□ -1.1
TSC2-223ENST00000568566 TUBD1Q9UJT1 453 aa8.2□□□□□ -1.1
TSC2-223ENST00000568566 ANAPC2Q9UJX6 822 aa8.2□□□□□ -1.1
TSC2-223ENST00000568566 PSMD13Q9UNM6 376 aa8.2□□□□□ -1.1
TSC2-223ENST00000568566 WDR37Q9Y2I8 494 aa8.2□□□□□ -1.1
TSC2-223ENST00000568566 B3GALT1Q9Y5Z6 326 aa8.2□□□□□ -1.1
TSC2-223ENST00000568566 PSAT1Q9Y617 370 aa8.2□□□□□ -1.1
TSC2-223ENST00000568566 SLC30A1Q9Y6M5 507 aa8.2□□□□□ -1.1
TSC2-223ENST00000568566 RPS6KL1Q9Y6S9 549 aa8.2□□□□□ -1.1
TSC2-223ENST00000568566 DGKBQ9Y6T7 804 aa8.2□□□□□ -1.1
TSC2-223ENST00000568566 FAM169AQ9Y6X4 670 aa8.2□□□□□ -1.1
TSC2-223ENST00000568566 PRRC2CQ9Y520 2896 aaKnown RBP8.2□□□□□ -1.1
TSC2-223ENST00000568566 ANKRD17O75179 2603 aaKnown RBP8.19□□□□□ -1.1
TSC2-223ENST00000568566 IGLV3-16A0A075B6K0 115 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 IGHV5-10-1A0A0J9YXX1 117 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 KRT87PA6NCN2 255 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 RHPN2P1A8MT19 583 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 ZNF891A8MT65 544 aaPredicted RBP8.19□□□□□ -1.1
TSC2-223ENST00000568566 TNFRSF10CO14798 259 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 HGSO14964 777 aaPredicted RBP8.19□□□□□ -1.1
TSC2-223ENST00000568566 CD3EAPO15446 510 aaKnown RBP8.19□□□□□ -1.1
TSC2-223ENST00000568566 NKX2-8O15522 239 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 B4GAT1O43505 415 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 NUDT21O43809 227 aaKnown RBP8.19□□□□□ -1.1
TSC2-223ENST00000568566 DUX1O43812 170 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 SNX2O60749 519 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 HAUS5O94927 633 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 POLBP06746 335 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 FGF3P11487 239 aaPredicted RBP8.19□□□□□ -1.1
TSC2-223ENST00000568566 BRAFP15056 766 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 ZNF7P17097 686 aaPredicted RBP8.19□□□□□ -1.1
TSC2-223ENST00000568566 MSH3P20585 1137 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 ITGALP20701 1170 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 MPSTP25325 297 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 PDHA2P29803 388 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 ALDH4A1P30038 563 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 FMO4P31512 558 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 ACTR1BP42025 376 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 DRG2P55039 364 aaKnown RBP8.19□□□□□ -1.1
TSC2-223ENST00000568566 CSE1LP55060 971 aaKnown RBP8.19□□□□□ -1.1
TSC2-223ENST00000568566 ACTR1AP61163 376 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 TIAL1Q01085 375 aaKnown RBP eCLIP8.19□□□□□ -1.1
TSC2-223ENST00000568566 TUBB2AQ13885 445 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 NFE2L1Q14494 772 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 CRYMQ14894 314 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 EFTUD2Q15029 972 aaKnown RBP eCLIP8.19□□□□□ -1.16e-7■■■■□ 20.5
TSC2-223ENST00000568566 BRD3Q15059 726 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 SEPT7Q16181 437 aaKnown RBP8.19□□□□□ -1.1
TSC2-223ENST00000568566 HSP90AA5PQ58FG0 334 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 STEAP4Q687X5 459 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 KIAA0930Q6ICG6 404 aaPredicted RBP8.19□□□□□ -1.1
TSC2-223ENST00000568566 NEPROQ6NW34 567 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 DUS1LQ6P1R4 473 aaKnown RBP8.19□□□□□ -1.1
TSC2-223ENST00000568566 CNSTQ6PJW8 725 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 MAATS1Q7Z4T9 603 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 HOOK3Q86VS8 718 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 FAM129CQ86XR2 697 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 PHYKPLQ8IUZ5 450 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 VRK3Q8IV63 474 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 NAGSQ8N159 534 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 SPDYE1Q8NFV5 336 aaPredicted RBP8.19□□□□□ -1.1
TSC2-223ENST00000568566 UHMK1Q8TAS1 419 aaKnown RBP8.19□□□□□ -1.1
TSC2-223ENST00000568566 GPBAR1Q8TDU6 330 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 ZBTB9Q96C00 473 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 TAAR9Q96RI9 348 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 TUBB2BQ9BVA1 445 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 B3GNT4Q9C0J1 378 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 ANKZF1Q9H8Y5 726 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 MRM3Q9HC36 420 aaKnown RBP8.19□□□□□ -1.1
TSC2-223ENST00000568566 RAD18Q9NS91 495 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 IARS2Q9NSE4 1012 aaKnown RBP8.19□□□□□ -1.1
TSC2-223ENST00000568566 CATSPERZQ9NTU4 200 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 C20orf96Q9NUD7 363 aaPredicted RBP8.19□□□□□ -1.1
TSC2-223ENST00000568566 SMOXQ9NWM0 555 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 ZDHHC3Q9NYG2 299 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 TAAR2Q9P1P5 351 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 TSR3Q9UJK0 312 aaKnown RBP8.19□□□□□ -1.1
TSC2-223ENST00000568566 RIMKLBQ9ULI2 386 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 NFU1Q9UMS0 254 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 MED16Q9Y2X0 877 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 ABCA12Q86UK0 2595 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 LRBAP50851 2863 aa8.19□□□□□ -1.1
TSC2-223ENST00000568566 A6NCN8 305 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 PPM1DO15297 605 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 RAD1O60671 282 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 NIPSNAP2O75323 286 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 FAM155BO75949 473 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 PGAM1P18669 254 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 RPL10P27635 214 aaKnown RBP8.18□□□□□ -1.1
TSC2-223ENST00000568566 AKT1P31749 480 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms