RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 CLK3P49761 638 aaKnown RBP5.36□□□□□ -1.55
LINC01541-202ENST00000568095 RGS7P49802 495 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 AFF1P51825 1210 aaKnown RBP5.36□□□□□ -1.55
LINC01541-202ENST00000568095 NCS1P62166 190 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 SH3BP2P78314 561 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 KCNAB2Q13303 367 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 GPR50Q13585 617 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 CLCA4Q14CN2 919 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 NFE2Q16621 373 aaPredicted RBP5.36□□□□□ -1.55
LINC01541-202ENST00000568095 FAM83EQ2M2I3 478 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 SLC25A52Q3SY17 297 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 ZNF404Q494X3 552 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 PAGE3Q5JUK9 113 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 CLEC6AQ6EIG7 209 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 LAIR1Q6GTX8 287 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 SULT1C3Q6IMI6 304 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 DENND5AQ6IQ26 1287 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 CAPN13Q6MZZ7 669 aaPredicted RBP5.36□□□□□ -1.55
LINC01541-202ENST00000568095 SPATA19Q7Z5L4 167 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 DENND6AQ8IWF6 608 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 TP53INP2Q8IXH6 220 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 FAM20CQ8IXL6 584 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 FAM83FQ8NEG4 500 aaPredicted RBP5.36□□□□□ -1.55
LINC01541-202ENST00000568095 ZNF555Q8NEP9 628 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 PSMA8Q8TAA3 256 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 GRPEL2Q8TAA5 225 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 TSGA13Q96PP4 275 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 VAT1Q99536 393 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 SDHCQ99643 169 aaPredicted RBP5.36□□□□□ -1.55
LINC01541-202ENST00000568095 LRRC3Q9BY71 257 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 B3GNT5Q9BYG0 378 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 GABARAPL1Q9H0R8 117 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 CARS2Q9HA77 564 aaKnown RBP5.36□□□□□ -1.55
LINC01541-202ENST00000568095 LTB4R2Q9NPC1 389 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 RGS18Q9NS28 235 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 FAM105AQ9NUU6 356 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 POLR3BQ9NW08 1133 aaPredicted RBP5.36□□□□□ -1.55
LINC01541-202ENST00000568095 SMPD4Q9NXE4 827 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 DPP3Q9NY33 737 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 CCDC59Q9P031 241 aaKnown RBP5.36□□□□□ -1.55
LINC01541-202ENST00000568095 PIN4Q9Y237 131 aaKnown RBP5.36□□□□□ -1.55
LINC01541-202ENST00000568095 TRAPPC4Q9Y296 219 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 WBP11Q9Y2W2 641 aaKnown RBP5.36□□□□□ -1.55
LINC01541-202ENST00000568095 GBF1Q92538 1859 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 PLXNA4Q9HCM2 1894 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 CDH23Q9H251 3354 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 A0A0U1RQF3 1178 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 TSPAN6O43657 245 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 IL1RNP18510 177 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 FSHRP23945 695 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 RRM2P31350 389 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 MATKP42679 507 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 SLC1A2P43004 574 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 IST1P53990 364 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 OR4D2P58180 307 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 OSTNP61366 133 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 HERVK_113P63132 956 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 GALNT3Q14435 633 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 GBX1Q14549 363 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 MAPK11Q15759 364 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 CDONQ4KMG0 1287 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 CEP78Q5JTW2 689 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 OTUD3Q5T2D3 398 aaPredicted RBP5.36□□□□□ -1.55
LINC01541-202ENST00000568095 AGAP9Q5VTM2 703 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 DLEU7Q6UYE1 221 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 RPS27LQ71UM5 84 aaKnown RBP5.36□□□□□ -1.55
LINC01541-202ENST00000568095 B3GNT8Q7Z7M8 397 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 SLC38A6Q8IZM9 456 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 NLGN4XQ8N0W4 816 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 LILRB2Q8N423 598 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 SPATA6LQ8N4H0 392 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 PARP16Q8N5Y8 322 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 AADATQ8N5Z0 425 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 C12orf29Q8N999 325 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 DNAAF3Q8N9W5 541 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 POC5Q8NA72 575 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 CLEC4CQ8WTT0 213 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 RORBQ92753 470 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 RNF145Q96MT1 663 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 PKMYT1Q99640 499 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 OCSTAMPQ9BR26 566 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 ERVK-6Q9BXR3 956 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 SAP130Q9H0E3 1048 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 IL1RL2Q9HB29 575 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 ACOT13Q9NPJ3 140 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 ABCB10Q9NRK6 738 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 ACOXLQ9NUZ1 547 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 AIG1Q9NVV5 245 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 MIOSQ9NXC5 875 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 ERVK-18Q9QC07 812 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 PADI3Q9ULW8 664 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 USP22Q9UPT9 525 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 DENND4CQ5VZ89 1909 aa5.36□□□□□ -1.55
LINC01541-202ENST00000568095 A0A0G2JMP0 313 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 PRMT5O14744 637 aaPredicted RBP5.35□□□□□ -1.55
LINC01541-202ENST00000568095 GABRDO14764 452 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 DSCR3O14972 297 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 B4GALT3O60512 393 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 NBNO60934 754 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 CDK14O94921 469 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms