RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 ACSL5Q9ULC5 683 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 RAXQ9Y2V3 346 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 TRBV5-4A0A0C4DH59 114 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 IQANK1A0A1B0GTG1 560 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 ZCWPW2A0A1B0GU75 182 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 HGSO14964 777 aaPredicted RBP13.15□□□□□ -0.3
CLK3-218ENST00000566926 SYF2O95926 243 aaKnown RBP13.15□□□□□ -0.3
CLK3-218ENST00000566926 ITGA2BP08514 1039 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 GSTM1P09488 218 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 ACRV1P26436 265 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 RPL10P27635 214 aaKnown RBP13.15□□□□□ -0.3
CLK3-218ENST00000566926 SERPINB9P50453 376 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 LIMK2P53671 638 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 PCBP4P57723 403 aaKnown RBP13.15□□□□□ -0.3
CLK3-218ENST00000566926 UBE2IP63279 158 aaKnown RBP13.15□□□□□ -0.3
CLK3-218ENST00000566926 CRADDP78560 199 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 GSTM4Q03013 218 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 SEPT7Q16181 437 aaKnown RBP13.15□□□□□ -0.3
CLK3-218ENST00000566926 KBTBD12Q3ZCT8 623 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 TSTD2Q5T7W7 516 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 METRNLQ641Q3 311 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 TMEM71Q6P5X7 295 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 FOXR1Q6PIV2 292 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 WDR74Q6RFH5 385 aaPredicted RBP13.15□□□□□ -0.3
CLK3-218ENST00000566926 CAPN12Q6ZSI9 719 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 DET1Q7L5Y6 550 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 SERPINA9Q86WD7 417 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 SLITRK4Q8IW52 837 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 ZNF248Q8NDW4 579 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 OR2L2Q8NH16 312 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 SLC44A1Q8WWI5 657 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 MTBPQ96DY7 904 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 SGF29Q96ES7 293 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 CCDC97Q96F63 343 aaPredicted RBP13.15□□□□□ -0.3
CLK3-218ENST00000566926 PAFAH2Q99487 392 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 NUDT22Q9BRQ3 303 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 FAM167BQ9BTA0 163 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 DHRS4Q9BTZ2 278 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 FAM96AQ9H5X1 160 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 RDH14Q9HBH5 336 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 PPANQ9NQ55 473 aaKnown RBP13.15□□□□□ -0.3
CLK3-218ENST00000566926 CHRAC1Q9NRG0 131 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 TREX1Q9NSU2 369 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 ZFATQ9P243 1243 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 TXNDC16Q9P2K2 825 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 ACTL7BQ9Y614 415 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 ASPMQ8IZT6 3477 aa13.15□□□□□ -0.3
CLK3-218ENST00000566926 IGLV3-16A0A075B6K0 115 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 A0A087WV48 116 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 C17orf113A0A1B0GUU1 675 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 CCL22O00626 93 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 CASC3O15234 703 aaKnown RBP13.14□□□□□ -0.31
CLK3-218ENST00000566926 KRT37O76014 449 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 KRT38O76015 456 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 TNFSF15O95150 251 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 PBLDP30039 288 aaPredicted RBP13.14□□□□□ -0.31
CLK3-218ENST00000566926 CA5AP35218 305 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 EIF2S3P41091 472 aaKnown RBP13.14□□□□□ -0.31
CLK3-218ENST00000566926 SLC19A1P41440 591 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 PRLHRP49683 370 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 PRAMEP78395 509 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 ACVR1Q04771 509 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 ITIH4Q14624 930 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 NKAIN2Q5VXU1 208 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 ADGRD1Q6QNK2 874 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 AFTPHQ6ULP2 937 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 CERS6Q6ZMG9 384 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 KIAA0408Q6ZU52 694 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 TMEM26Q6ZUK4 368 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 PLXDC1Q8IUK5 500 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 CNTN4Q8IWV2 1026 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 CTAGE3PQ8IX95 158 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 UHMK1Q8TAS1 419 aaKnown RBP13.14□□□□□ -0.31
CLK3-218ENST00000566926 HM13Q8TCT9 377 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 EPS8L3Q8TE67 593 aaKnown RBP13.14□□□□□ -0.31
CLK3-218ENST00000566926 NCSTNQ92542 709 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 MFSD3Q96ES6 412 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 CPNE1Q99829 537 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 CCM2Q9BSQ5 444 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 CENPHQ9H3R5 247 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 SEMA6CQ9H3T2 930 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 PLAC1Q9HBJ0 212 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 ASCL3Q9NQ33 180 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 SCHIP1Q9P0W5 487 aaPredicted RBP13.14□□□□□ -0.31
CLK3-218ENST00000566926 ZNF624Q9P2J8 865 aaPredicted RBP13.14□□□□□ -0.31
CLK3-218ENST00000566926 LOXL2Q9Y4K0 774 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 AHCTF1Q8WYP5 2266 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 PKD1L2Q7Z442 2459 aa13.14□□□□□ -0.31
CLK3-218ENST00000566926 FREM2Q5SZK8 3169 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 IGHV5-10-1A0A0J9YXX1 117 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 TLDC2A0PJX2 215 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 POC1B-GALNT4F8VUJ3 575 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 TLX3O43711 291 aaPredicted RBP13.13□□□□□ -0.31
CLK3-218ENST00000566926 AP2A2O94973 939 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 C1QAP02745 245 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 BRAFP15056 766 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 AMD1P17707 334 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 CSTF2P33240 577 aaKnown RBP eCLIP13.13□□□□□ -0.31
CLK3-218ENST00000566926 NSG1P42857 185 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 THOC5Q13769 683 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms