RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 LRRC15Q8TF66 581 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 FAM149B1Q96BN6 582 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 GCC1Q96CN9 775 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 CNOT6LQ96LI5 555 aaKnown RBP1.82□□□□□ -2.12
SMG1-212ENST00000566328 NUDCD1Q96RS6 583 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 MAP7D2Q96T17 732 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 PSMB7Q99436 277 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 GFI1Q99684 422 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 STRA6Q9BX79 667 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 MTMR10Q9NXD2 777 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 NDE1Q9NXR1 346 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 MKLN1Q9UL63 735 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 R3HDM2Q9Y2K5 976 aaKnown RBP1.82□□□□□ -2.12
SMG1-212ENST00000566328 WIZO95785 1651 aa1.82□□□□□ -2.12
SMG1-212ENST00000566328 RSF1Q96T23 1441 aaPredicted RBP1.82□□□□□ -2.12
SMG1-212ENST00000566328 CCDC196A0A1B0GTZ2 297 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 ELOVL7A1L3X0 281 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 NDUFS3O75489 264 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 SEC14L2O76054 403 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 DFFBO76075 338 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 PRB2P02812 416 aaPredicted RBP1.81□□□□□ -2.12
SMG1-212ENST00000566328 CYP2A7P20853 494 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 MTHFRP42898 656 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 PRKAA1Q13131 559 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 PPFIA1Q13136 1202 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 FRG1Q14331 258 aaKnown RBP1.81□□□□□ -2.12
SMG1-212ENST00000566328 RFTN1Q14699 578 aaPredicted RBP1.81□□□□□ -2.12
SMG1-212ENST00000566328 TAF12Q16514 161 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 GCNT6Q5T4J0 391 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 FAM69AQ5T7M9 428 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 FHL5Q5TD97 284 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 RSBN1Q5VWQ0 802 aaPredicted RBP1.81□□□□□ -2.12
SMG1-212ENST00000566328 OLFML2AQ68BL7 652 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 ADALQ6DHV7 355 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 VITQ6UXI7 678 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 LRRTM4Q86VH4 590 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 ANKRD18AQ8IVF6 992 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 ZBED8Q8IZ13 594 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 PARP8Q8N3A8 854 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 DAZLQ92904 295 aaKnown RBP1.81□□□□□ -2.12
SMG1-212ENST00000566328 UBXN10Q96LJ8 280 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 AGAP4Q96P64 663 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 SMC4Q9NTJ3 1288 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 NYAP2Q9P242 653 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 POMT2Q9UKY4 750 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 NTNG1Q9Y2I2 539 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 RIPK3Q9Y572 518 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 PCDHGB3Q9Y5G1 929 aa1.81□□□□□ -2.12
SMG1-212ENST00000566328 BAZ1BQ9UIG0 1483 aaKnown RBP1.81□□□□□ -2.12
SMG1-212ENST00000566328 SMARCA4P51532 1647 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 SRRM5B3KS81 715 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 HCRTR2O43614 444 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 PAGE4O60829 102 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 MELTFP08582 738 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 HNRNPA1P09651 372 aaKnown RBP eCLIP1.8□□□□□ -2.12
SMG1-212ENST00000566328 ACP2P11117 423 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 CA4P22748 312 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 MAPK9P45984 424 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 LEPRP48357 1165 aaKnown RBP1.8□□□□□ -2.12
SMG1-212ENST00000566328 CSTF3Q12996 717 aaKnown RBP1.8□□□□□ -2.12
SMG1-212ENST00000566328 LRIF1Q5T3J3 769 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 LINGO4Q6UY18 593 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 INTS8Q75QN2 995 aaKnown RBP1.8□□□□□ -2.12
SMG1-212ENST00000566328 ZNF354CQ86Y25 554 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 KIRREL3Q8IZU9 778 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 GOLGA6L2Q8N9W4 650 aaPredicted RBP1.8□□□□□ -2.12
SMG1-212ENST00000566328 OR6S1Q8NH40 331 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 MAPK15Q8TD08 544 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 KCNG4Q8TDN1 519 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 TRPC4APQ8TEL6 797 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 SMAP2Q8WU79 429 aaPredicted RBP1.8□□□□□ -2.12
SMG1-212ENST00000566328 CENPTQ96BT3 561 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 SLC39A13Q96H72 371 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 MAELQ96JY0 434 aaKnown RBP1.8□□□□□ -2.12
SMG1-212ENST00000566328 C1orf147Q96MC9 270 aaPredicted RBP1.8□□□□□ -2.12
SMG1-212ENST00000566328 NR1H4Q96RI1 486 aaPredicted RBP1.8□□□□□ -2.12
SMG1-212ENST00000566328 MPHOSPH6Q99547 160 aaKnown RBP1.8□□□□□ -2.12
SMG1-212ENST00000566328 MED20Q9H944 212 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 GNB4Q9HAV0 340 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 MBNL1Q9NR56 388 aaKnown RBP1.8□□□□□ -2.12
SMG1-212ENST00000566328 ANAPC11Q9NYG5 84 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 ZNF107Q9UII5 783 aaPredicted RBP1.8□□□□□ -2.12
SMG1-212ENST00000566328 ZNF256Q9Y2P7 627 aaPredicted RBP1.8□□□□□ -2.12
SMG1-212ENST00000566328 ANGPTL3Q9Y5C1 460 aa1.8□□□□□ -2.12
SMG1-212ENST00000566328 SPIN1Q9Y657 262 aaPredicted RBP1.8□□□□□ -2.12
SMG1-212ENST00000566328 TMEM8BA6NDV4 472 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 PLEKHD1A6NEE1 506 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 E9PI62 339 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 H3BQ06 376 aaPredicted RBP1.79□□□□□ -2.12
SMG1-212ENST00000566328 GPC4O75487 556 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 F9P00740 461 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 THEGLP0DJG4 465 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 FOLR2P14207 255 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 IL4RP24394 825 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 CAPGP40121 348 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 MSH2P43246 934 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 TSFMP43897 325 aaKnown RBP1.79□□□□□ -2.12
SMG1-212ENST00000566328 TRAPPC10P48553 1259 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 LYZP61626 148 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 OLR1P78380 273 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms