RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 ULK4Q96C45 1275 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 DCUN1D1Q96GG9 259 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 SPATA13Q96N96 652 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 FERD3LQ96RJ6 166 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 C19orf43Q9BQ61 176 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 OSBPL8Q9BZF1 889 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 SRMSQ9H3Y6 488 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 ACSS2Q9NR19 701 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 EFR3BQ9Y2G0 817 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 HEBP2Q9Y5Z4 205 aa18.27■□□□□ 0.52
ABCA3-204ENST00000566200 FER1L5A0AVI2 2057 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 MACROD2A1Z1Q3 448 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 GSAPA4D1B5 854 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 TTLL8A6PVC2 850 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 TMEM150CB9EJG8 249 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 SORBS2O94875 1100 aaKnown RBP18.26■□□□□ 0.51
ABCA3-204ENST00000566200 KLK3P07288 261 aaPredicted RBP18.26■□□□□ 0.51
ABCA3-204ENST00000566200 MSL3P1P0C860 447 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 RALBP11234 206 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 PVRP15151 417 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 ITGALP20701 1170 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 GNLYP22749 145 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 LMAN1P49257 510 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 PRKAA1Q13131 559 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 KRT33BQ14525 404 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 CCDC181Q5TID7 509 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 PHC3Q8NDX5 983 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 OR52E1Q8NGJ3 308 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 LCN9Q8WX39 176 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 CPT1BQ92523 772 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 CLIP3Q96DZ5 547 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 DNAJC1Q96KC8 554 aaKnown RBP18.26■□□□□ 0.51
ABCA3-204ENST00000566200 TBL1YQ9BQ87 522 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 NLNQ9BYT8 704 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 ZDHHC3Q9NYG2 299 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 TCFL5Q9UL49 500 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 DUSP10Q9Y6W6 482 aa18.26■□□□□ 0.51
ABCA3-204ENST00000566200 MATN2O00339 956 aa18.25■□□□□ 0.51
ABCA3-204ENST00000566200 PTMSP20962 102 aa18.25■□□□□ 0.51
ABCA3-204ENST00000566200 MC4RP32245 332 aa18.25■□□□□ 0.51
ABCA3-204ENST00000566200 PREPP48147 710 aa18.25■□□□□ 0.51
ABCA3-204ENST00000566200 ITGA1P56199 1179 aa18.25■□□□□ 0.51
ABCA3-204ENST00000566200 BOP1Q14137 746 aaKnown RBP18.25■□□□□ 0.51
ABCA3-204ENST00000566200 PRPSAP1Q14558 356 aa18.25■□□□□ 0.51
ABCA3-204ENST00000566200 PTCHD3Q3KNS1 767 aa18.25■□□□□ 0.51
ABCA3-204ENST00000566200 ZNF385CQ66K41 422 aaPredicted RBP18.25■□□□□ 0.51
ABCA3-204ENST00000566200 KCTD11Q693B1 232 aa18.25■□□□□ 0.51
ABCA3-204ENST00000566200 DARS2Q6PI48 645 aaKnown RBP18.25■□□□□ 0.51
ABCA3-204ENST00000566200 SYTL1Q8IYJ3 562 aa18.25■□□□□ 0.51
ABCA3-204ENST00000566200 CCDC170Q8IYT3 715 aa18.25■□□□□ 0.51
ABCA3-204ENST00000566200 ADGRF3Q8IZF5 1079 aa18.25■□□□□ 0.51
ABCA3-204ENST00000566200 CLDN19Q8N6F1 224 aa18.25■□□□□ 0.51
ABCA3-204ENST00000566200 CPT1CQ8TCG5 803 aa18.25■□□□□ 0.51
ABCA3-204ENST00000566200 ALG3Q92685 438 aa18.25■□□□□ 0.51
ABCA3-204ENST00000566200 TRAPPC9Q96Q05 1148 aa18.25■□□□□ 0.51
ABCA3-204ENST00000566200 KLHL25Q9H0H3 589 aa18.25■□□□□ 0.51
ABCA3-204ENST00000566200 TFB2MQ9H5Q4 396 aaKnown RBP18.25■□□□□ 0.51
ABCA3-204ENST00000566200 XKR8Q9H6D3 395 aa18.25■□□□□ 0.51
ABCA3-204ENST00000566200 ACTR5Q9H9F9 607 aaPredicted RBP18.25■□□□□ 0.51
ABCA3-204ENST00000566200 SNX7Q9UNH6 387 aa18.25■□□□□ 0.51
ABCA3-204ENST00000566200 MAP4K5Q9Y4K4 846 aa18.25■□□□□ 0.51
ABCA3-204ENST00000566200 PIKFYVEQ9Y2I7 2098 aa18.25■□□□□ 0.51
ABCA3-204ENST00000566200 TMEM63AO94886 807 aa18.24■□□□□ 0.51
ABCA3-204ENST00000566200 CTNNA2P26232 953 aa18.24■□□□□ 0.51
ABCA3-204ENST00000566200 ACRV1P26436 265 aa18.24■□□□□ 0.51
ABCA3-204ENST00000566200 HADHAP40939 763 aa18.24■□□□□ 0.51
ABCA3-204ENST00000566200 CD151P48509 253 aa18.24■□□□□ 0.51
ABCA3-204ENST00000566200 GPR33Q49SQ1 333 aa18.24■□□□□ 0.51
ABCA3-204ENST00000566200 PRR30Q53SZ7 412 aaPredicted RBP18.24■□□□□ 0.51
ABCA3-204ENST00000566200 SARM1Q6SZW1 724 aa18.24■□□□□ 0.51
ABCA3-204ENST00000566200 CDHR3Q6ZTQ4 885 aa18.24■□□□□ 0.51
ABCA3-204ENST00000566200 SERPINA9Q86WD7 417 aa18.24■□□□□ 0.51
ABCA3-204ENST00000566200 PIANPQ8IYJ0 282 aa18.24■□□□□ 0.51
ABCA3-204ENST00000566200 ZBTB2Q8N680 514 aa18.24■□□□□ 0.51
ABCA3-204ENST00000566200 GALNT11Q8NCW6 608 aa18.24■□□□□ 0.51
ABCA3-204ENST00000566200 FDCSPQ8NFU4 85 aa18.24■□□□□ 0.51
ABCA3-204ENST00000566200 HEXDCQ8WVB3 486 aa18.24■□□□□ 0.51
ABCA3-204ENST00000566200 HGH1Q9BTY7 390 aa18.24■□□□□ 0.51
ABCA3-204ENST00000566200 NUDT9Q9BW91 350 aa18.24■□□□□ 0.51
ABCA3-204ENST00000566200 FANCEQ9HB96 536 aa18.24■□□□□ 0.51
ABCA3-204ENST00000566200 SYTL2Q9HCH5 934 aa18.24■□□□□ 0.51
ABCA3-204ENST00000566200 CFAP99D6REC4 459 aa18.23■□□□□ 0.51
ABCA3-204ENST00000566200 H3BMH7 237 aa18.23■□□□□ 0.51
ABCA3-204ENST00000566200 H7C0S8 307 aa18.23■□□□□ 0.51
ABCA3-204ENST00000566200 HCRTR1O43613 425 aa18.23■□□□□ 0.51
ABCA3-204ENST00000566200 VPS4BO75351 444 aa18.23■□□□□ 0.51
ABCA3-204ENST00000566200 TPH1P17752 444 aa18.23■□□□□ 0.51
ABCA3-204ENST00000566200 CYP2A7P20853 494 aa18.23■□□□□ 0.51
ABCA3-204ENST00000566200 PRKG2Q13237 762 aa18.23■□□□□ 0.51
ABCA3-204ENST00000566200 SPA17Q15506 151 aa18.23■□□□□ 0.51
ABCA3-204ENST00000566200 SKOR2Q2VWA4 1001 aaPredicted RBP18.23■□□□□ 0.51
ABCA3-204ENST00000566200 HIST2H2BCQ6DN03 193 aa18.23■□□□□ 0.51
ABCA3-204ENST00000566200 AMIGO1Q86WK6 493 aa18.23■□□□□ 0.51
ABCA3-204ENST00000566200 Q8NA96 180 aa18.23■□□□□ 0.51
ABCA3-204ENST00000566200 FERMT1Q9BQL6 677 aa18.23■□□□□ 0.51
ABCA3-204ENST00000566200 MVB12BQ9H7P6 319 aa18.23■□□□□ 0.51
ABCA3-204ENST00000566200 FAM60AQ9NP50 221 aa18.23■□□□□ 0.51
ABCA3-204ENST00000566200 NLE1Q9NVX2 485 aaPredicted RBP18.23■□□□□ 0.51
ABCA3-204ENST00000566200 ACTR10Q9NZ32 417 aa18.23■□□□□ 0.51
ABCA3-204ENST00000566200 VPS4AQ9UN37 437 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms