RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 FGF21Q9NSA1 209 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 CATSPERZQ9NTU4 200 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 SOHLH2Q9NX45 425 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 FAM8A1Q9UBU6 413 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 LNPEPQ9UIQ6 1025 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 POMT2Q9UKY4 750 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 TTC7AQ9ULT0 858 aaPredicted RBP16.29■□□□□ 0.2
USB1-211ENST00000565662 CFAP20Q9Y6A4 193 aaKnown RBP16.29■□□□□ 0.2
USB1-211ENST00000565662 RPS6KL1Q9Y6S9 549 aa16.29■□□□□ 0.2
USB1-211ENST00000565662 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.28■□□□□ 0.2
USB1-211ENST00000565662 CCDC78A2IDD5 438 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 CCDC162PA2VCL2 907 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 OR6C74A6NCV1 312 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 H3BMM5 538 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 SPAG6O75602 509 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 GOT2P00505 430 aaKnown RBP16.28■□□□□ 0.2
USB1-211ENST00000565662 CDH3P22223 829 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 CA5AP35218 305 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 COL9A2Q14055 689 aaPredicted RBP16.28■□□□□ 0.2
USB1-211ENST00000565662 BOP1Q14137 746 aaKnown RBP16.28■□□□□ 0.2
USB1-211ENST00000565662 SIX1Q15475 284 aaPredicted RBP16.28■□□□□ 0.2
USB1-211ENST00000565662 ZNF658BQ4V348 819 aaPredicted RBP16.28■□□□□ 0.2
USB1-211ENST00000565662 MRNIPQ6NTE8 343 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 ZNF605Q86T29 641 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 AMIGO1Q86WK6 493 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 PIANPQ8IYJ0 282 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 RAB42Q8N4Z0 105 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 GABPB2Q8TAK5 448 aaPredicted RBP16.28■□□□□ 0.2
USB1-211ENST00000565662 HDAC10Q969S8 669 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 PMEPA1Q969W9 287 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 LRFN5Q96NI6 719 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 MAP3K3Q99759 626 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 C17orf62Q9BQA9 187 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 CARD6Q9BX69 1037 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 RAB11FIP5Q9BXF6 653 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 FAM96AQ9H5X1 160 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 APMAPQ9HDC9 416 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 OR6C2Q9NZP2 312 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 GNPTGQ9UJJ9 305 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 PADI1Q9ULC6 663 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 ASF1AQ9Y294 204 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 PCDHGA6Q9Y5G7 932 aa16.28■□□□□ 0.2
USB1-211ENST00000565662 SMG1Q96Q15 3661 aaKnown RBP16.27■□□□□ 0.2
USB1-211ENST00000565662 IGHV5-51A0A0C4DH38 117 aa16.27■□□□□ 0.2
USB1-211ENST00000565662 CES2O00748 559 aa16.27■□□□□ 0.2
USB1-211ENST00000565662 PRMT5O14744 637 aaPredicted RBP16.27■□□□□ 0.2
USB1-211ENST00000565662 KIAA0754O94854 1291 aa16.27■□□□□ 0.2
USB1-211ENST00000565662 FKBP9O95302 570 aa16.27■□□□□ 0.2
USB1-211ENST00000565662 APOA4P06727 396 aa16.27■□□□□ 0.2
USB1-211ENST00000565662 HBQ1P09105 142 aa16.27■□□□□ 0.2
USB1-211ENST00000565662 TCN2P20062 427 aa16.27■□□□□ 0.2
USB1-211ENST00000565662 RPL22P35268 128 aaKnown RBP16.27■□□□□ 0.2
USB1-211ENST00000565662 CCR10P46092 362 aa16.27■□□□□ 0.2
USB1-211ENST00000565662 CDC20Q12834 499 aa16.27■□□□□ 0.2
USB1-211ENST00000565662 CCDC38Q502W7 563 aa16.27■□□□□ 0.2
USB1-211ENST00000565662 LRRC8BQ6P9F7 803 aa16.27■□□□□ 0.2
USB1-211ENST00000565662 TTC23LQ6PF05 361 aa16.27■□□□□ 0.2
USB1-211ENST00000565662 PCSK4Q6UW60 755 aa16.27■□□□□ 0.2
USB1-211ENST00000565662 SDCCAG8Q86SQ7 713 aaPredicted RBP16.27■□□□□ 0.2
USB1-211ENST00000565662 ZNF843Q8N446 348 aa16.27■□□□□ 0.2
USB1-211ENST00000565662 SPDYE1Q8NFV5 336 aaPredicted RBP16.27■□□□□ 0.2
USB1-211ENST00000565662 OR5K2Q8NHB8 316 aa16.27■□□□□ 0.2
USB1-211ENST00000565662 STARD8Q92502 1023 aa16.27■□□□□ 0.2
USB1-211ENST00000565662 SLC22A18Q96BI1 424 aa16.27■□□□□ 0.2
USB1-211ENST00000565662 DPH2Q9BQC3 489 aaPredicted RBP16.27■□□□□ 0.2
USB1-211ENST00000565662 GPR87Q9BY21 358 aa16.27■□□□□ 0.2
USB1-211ENST00000565662 CHRNA10Q9GZZ6 450 aa16.27■□□□□ 0.2
USB1-211ENST00000565662 KCND1Q9NSA2 647 aa16.27■□□□□ 0.2
USB1-211ENST00000565662 GEMIN8Q9NWZ8 242 aaKnown RBP16.27■□□□□ 0.2
USB1-211ENST00000565662 HEMK1Q9Y5R4 338 aaPredicted RBP16.27■□□□□ 0.2
USB1-211ENST00000565662 MGAQ8IWI9 3026 aa16.26■□□□□ 0.19
USB1-211ENST00000565662 MAGEB16A2A368 324 aa16.26■□□□□ 0.19
USB1-211ENST00000565662 GSAPA4D1B5 854 aa16.26■□□□□ 0.19
USB1-211ENST00000565662 B8ZZF3 427 aa16.26■□□□□ 0.19
USB1-211ENST00000565662 PGRMC1O00264 195 aaKnown RBP16.26■□□□□ 0.19
USB1-211ENST00000565662 CCL22O00626 93 aa16.26■□□□□ 0.19
USB1-211ENST00000565662 KLK3P07288 261 aaPredicted RBP16.26■□□□□ 0.19
USB1-211ENST00000565662 CD63P08962 238 aa16.26■□□□□ 0.19
USB1-211ENST00000565662 MLNP12872 115 aa16.26■□□□□ 0.19
USB1-211ENST00000565662 UNC5DQ6UXZ4 953 aa16.26■□□□□ 0.19
USB1-211ENST00000565662 RASGEF1CQ8N431 466 aa16.26■□□□□ 0.19
USB1-211ENST00000565662 TAB3Q8N5C8 712 aaPredicted RBP16.26■□□□□ 0.19
USB1-211ENST00000565662 CLDN19Q8N6F1 224 aa16.26■□□□□ 0.19
USB1-211ENST00000565662 OR52E1Q8NGJ3 308 aa16.26■□□□□ 0.19
USB1-211ENST00000565662 JPH3Q8WXH2 748 aaPredicted RBP16.26■□□□□ 0.19
USB1-211ENST00000565662 CPT1BQ92523 772 aa16.26■□□□□ 0.19
USB1-211ENST00000565662 TCF12Q99081 682 aa16.26■□□□□ 0.19
USB1-211ENST00000565662 PITPNM3Q9BZ71 974 aa16.26■□□□□ 0.19
USB1-211ENST00000565662 XAB2Q9HCS7 855 aaKnown RBP16.26■□□□□ 0.19
USB1-211ENST00000565662 SAMD15Q9P1V8 674 aa16.26■□□□□ 0.19
USB1-211ENST00000565662 SLC5A10A0PJK1 596 aa16.25■□□□□ 0.19
USB1-211ENST00000565662 PIPSLA2A3N6 862 aa16.25■□□□□ 0.19
USB1-211ENST00000565662 KIF1CO43896 1103 aaKnown RBP16.25■□□□□ 0.19
USB1-211ENST00000565662 KIF5CO60282 957 aa16.25■□□□□ 0.19
USB1-211ENST00000565662 POLR2CP19387 275 aaPredicted RBP16.25■□□□□ 0.19
USB1-211ENST00000565662 RPS3P23396 243 aaKnown RBP eCLIP16.25■□□□□ 0.192e-6■■□□□ 14.1
USB1-211ENST00000565662 DLSTP36957 453 aa16.25■□□□□ 0.19
USB1-211ENST00000565662 MAGEA6P43360 314 aa16.25■□□□□ 0.19
USB1-211ENST00000565662 CDKN1CP49918 316 aaPredicted RBP16.25■□□□□ 0.19
USB1-211ENST00000565662 ADARP55265 1226 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms