RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 RFX8Q6ZV50 586 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 TMTC1Q8IUR5 882 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 BEND7Q8N7W2 519 aaPredicted RBP8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 LRRN4CLQ8ND94 238 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 SLC20A1Q8WUM9 679 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 HAS2Q92819 552 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 GLYATL1Q969I3 302 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 ZNF559Q9BR84 538 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 CNPY3Q9BT09 278 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 ZSCAN5AQ9BUG6 496 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 DEF6Q9H4E7 631 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 DHX35Q9H5Z1 703 aaKnown RBP8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 SLC6A20Q9NP91 592 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 RAD18Q9NS91 495 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 SEPT11Q9NVA2 429 aaKnown RBP8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 ADAM22Q9P0K1 906 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 CDC23Q9UJX2 597 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 MEMO1Q9Y316 297 aa8.76□□□□□ -1.01
VPS9D1-205ENST00000565452 MATN2O00339 956 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 CCP110O43303 1012 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 NRDCO43847 1150 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 AKR1B10O60218 316 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 KLHL18O94889 574 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 FTLP02792 175 aaPredicted RBP8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 UMODP07911 640 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 ATXN8OSP0DMR3 200 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 CA4P22748 312 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 MST1P26927 711 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 CYLC1P35663 651 aaPredicted RBP8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 HCAR3P49019 387 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 TNFSF10P50591 281 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 ZNF135P52742 658 aaPredicted RBP8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 CDH6P55285 790 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 RPL26P61254 145 aaKnown RBP8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 ASTE1Q2TB18 679 aaPredicted RBP8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 KRTCAP3Q53RY4 240 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 ERMARDQ5T6L9 678 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 C1orf189Q5VU69 101 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 PDPK2PQ6A1A2 396 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 MRPL14Q6P1L8 145 aaKnown RBP8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 ALKBH5Q6P6C2 394 aaKnown RBP8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 Q71RC1 249 aaPredicted RBP8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 AMZ2Q86W34 360 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 PRIMA1Q86XR5 153 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 MCOLN2Q8IZK6 566 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 DNAAF3Q8N9W5 541 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 SUN3Q8TAQ9 357 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 PROKR1Q8TCW9 393 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 NUDT8Q8WV74 236 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 MAGED4Q96JG8 741 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 TTC25Q96NG3 672 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 LYSMD1Q96S90 227 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 PCDHB18PQ96TA0 734 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 C11orf70Q9BRQ4 267 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 TMEM121Q9BTD3 319 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 NHEJ1Q9H9Q4 299 aaPredicted RBP8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 SLC24A3Q9HC58 644 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 MRPL47Q9HD33 250 aaKnown RBP8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 LUC7LQ9NQ29 371 aaKnown RBP8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 PARVAQ9NVD7 372 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 INTUQ9ULD6 942 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 RPL26L1Q9UNX3 145 aaKnown RBP8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 AP4E1Q9UPM8 1137 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 CHKBQ9Y259 395 aa8.75□□□□□ -1.01
VPS9D1-205ENST00000565452 COL6A5A8TX70 2615 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 GSAPA4D1B5 854 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 DDX3XO00571 662 aaKnown RBP eCLIP8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 MAFKO60675 156 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 OR2B3O76000 313 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 MLYCDO95822 493 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 PEX11BO96011 259 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 PIM1P11309 404 aaPredicted RBP8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 POLR2CP19387 275 aaPredicted RBP8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 UGT1A4P22310 534 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 DNASE1P24855 282 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 PRDX3P30048 256 aaKnown RBP8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 ADSLP30566 484 aaPredicted RBP8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 MEOX1P50221 254 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 TMEM115Q12893 351 aaPredicted RBP8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 PTP4A2Q12974 167 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 XRCC4Q13426 336 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 GTF2H3Q13889 308 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 GALNT3Q14435 633 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 KRT33BQ14525 404 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 NKAIN1Q4KMZ8 207 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 CCDC122Q5T0U0 273 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 TMEM198Q66K66 360 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 E4F1Q66K89 784 aaPredicted RBP8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 RHBDD2Q6NTF9 364 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 MON1BQ7L1V2 547 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 SPPL2CQ8IUH8 684 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 TRAPPC5Q8IUR0 188 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 ZNF547Q8IVP9 402 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 EID3Q8N140 333 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 TXLNBQ8N3L3 684 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 TRAM1L1Q8N609 369 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 NPWQ8N729 165 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 C3orf20Q8ND61 904 aa8.74□□□□□ -1.01
VPS9D1-205ENST00000565452 OR4E2Q8NGC2 313 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms