RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 IL26Q9NPH9 171 aa7.31□□□□□ -1.24
MAP1LC3B-205ENST00000564638 RAD18Q9NS91 495 aa7.31□□□□□ -1.24
MAP1LC3B-205ENST00000564638 ZSCAN32Q9NX65 697 aa7.31□□□□□ -1.24
MAP1LC3B-205ENST00000564638 PKD2L2Q9NZM6 624 aa7.31□□□□□ -1.24
MAP1LC3B-205ENST00000564638 SLC7A8Q9UHI5 535 aa7.31□□□□□ -1.24
MAP1LC3B-205ENST00000564638 IKZF3Q9UKT9 509 aa7.31□□□□□ -1.24
MAP1LC3B-205ENST00000564638 PRPF19Q9UMS4 504 aaKnown RBP7.31□□□□□ -1.24
MAP1LC3B-205ENST00000564638 C15orf41Q9Y2V0 281 aa7.31□□□□□ -1.24
MAP1LC3B-205ENST00000564638 DHRS7Q9Y394 339 aa7.31□□□□□ -1.24
MAP1LC3B-205ENST00000564638 PPIL1Q9Y3C6 166 aa7.31□□□□□ -1.24
MAP1LC3B-205ENST00000564638 L3MBTL1Q9Y468 752 aa7.31□□□□□ -1.24
MAP1LC3B-205ENST00000564638 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.31□□□□□ -1.24
MAP1LC3B-205ENST00000564638 RALGAPA1Q6GYQ0 2036 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 A0A088AWK7 358 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 NCF1BA6NI72 391 aaPredicted RBP7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 NCF1CA8MVU1 366 aaPredicted RBP7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 UBFD1O14562 309 aaKnown RBP7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 AIM2O14862 343 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 RAD51BO15315 384 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 GPR39O43194 453 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 RNASEH1O60930 286 aaKnown RBP7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 FKBP6O75344 327 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 KRT36O76013 467 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 CDK14O94921 469 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 SIX3O95343 332 aaPredicted RBP7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 TRIM16O95361 564 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 FGF4P08620 206 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 ACADMP11310 421 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 TDGF1P13385 188 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 NCF1P14598 390 aaPredicted RBP7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 TSPAN8P19075 237 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 XPAP23025 273 aaPredicted RBP7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 VIPR1P32241 457 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 PSMD8P48556 350 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 CDH13P55290 713 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 PKNOX1P55347 436 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 ACTR3P61158 418 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 STX5Q13190 355 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 ART3Q13508 389 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 CAMK2GQ13555 558 aaPredicted RBP7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 FASTKQ14296 549 aaKnown RBP7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 LPAL2Q16609 132 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 HNRNPA1L2Q32P51 320 aaKnown RBP7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 ZNF528Q3MIS6 628 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 KHDC1Q4VXA5 237 aaKnown RBP7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 SWT1Q5T5J6 900 aaKnown RBP7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 GDPD4Q6W3E5 623 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 MAMSTRQ6ZN01 415 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 MACC1Q6ZN28 852 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 GPRIN3Q6ZVF9 776 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 CHSY3Q70JA7 882 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 TSPAN33Q86UF1 283 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 DDIASQ8IXT1 998 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 PGAM4Q8N0Y7 254 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 EFCAB3Q8N7B9 438 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 CHST14Q8NCH0 376 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 OR2T3Q8NH03 318 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 GANCQ8TET4 914 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 EEF1AKMT1Q8WVE0 214 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 WDR60Q8WVS4 1066 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 RLN3Q8WXF3 142 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 OR8D1Q8WZ84 308 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 RCN3Q96D15 328 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 SIPA1Q96FS4 1042 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 PDLIM5Q96HC4 596 aaKnown RBP7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 CLPTM1LQ96KA5 538 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 KLHL32Q96NJ5 620 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 NSUN5Q96P11 429 aaKnown RBP7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 LENG8Q96PV6 779 aaPredicted RBP7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 COPS8Q99627 209 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 SLC30A3Q99726 388 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 HEPHQ9BQS7 1158 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 BOCQ9BWV1 1114 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 FAM126AQ9BYI3 521 aaPredicted RBP7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 TMEM245Q9H330 911 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 EBF2Q9HAK2 575 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 TNFRSF12AQ9NP84 129 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 SEMA4BQ9NPR2 832 aaPredicted RBP7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 PRSS16Q9NQE7 514 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 KCTD5Q9NXV2 234 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 ZDHHC3Q9NYG2 299 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 GALPQ9UBC7 116 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 B4GALT6Q9UBX8 382 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 NKX1-2Q9UD57 310 aaPredicted RBP7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 BCAP29Q9UHQ4 241 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 PCTPQ9UKL6 214 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 CYP8B1Q9UNU6 501 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 PCDHGA2Q9Y5H1 932 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 TNPO3Q9Y5L0 923 aaKnown RBP7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 CEP192Q8TEP8 1941 aa7.3□□□□□ -1.24
MAP1LC3B-205ENST00000564638 HELZ2Q9BYK8 2649 aaKnown RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 TSPAN11A1L157 253 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 PABPN1LA6NDY0 278 aaKnown RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 LRRC14BA6NHZ5 514 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 IQCF5A8MTL0 148 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 A8MX80 341 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 UPK3BL1B0FP48 263 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 CFAP99D6REC4 459 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 UPK3BL2E5RIL1 263 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms