RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 LRIT1Q9P2V4 623 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 FETUBQ9UGM5 382 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 ZNF180Q9UJW8 692 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 SLC39A10Q9ULF5 831 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 NFS1Q9Y697 457 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 CCDC151A5D8V7 595 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 GIPC1O14908 333 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 TNFSF14O43557 240 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 MATN4O95460 622 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 NUDT17P0C025 328 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 ACP1P24666 158 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 HALP42357 657 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 NR0B2Q15466 257 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 TRIP6Q15654 476 aaKnown RBP12.17□□□□□ -0.46
KARS-204ENST00000564578 ZKSCAN8Q15776 578 aaPredicted RBP12.17□□□□□ -0.46
KARS-204ENST00000564578 PERM1Q5SV97 790 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 ADGRD1Q6QNK2 874 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 ZNF438Q7Z4V0 828 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 OR2W6PQ8NHA6 318 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 MAPK15Q8TD08 544 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 CDC6Q99741 560 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 NCKIPSDQ9NZQ3 722 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 TRMT6Q9UJA5 497 aaKnown RBP12.17□□□□□ -0.46
KARS-204ENST00000564578 CPED1A4D0V7 1026 aa12.16□□□□□ -0.46
KARS-204ENST00000564578 ALDOAP04075 364 aaKnown RBP12.16□□□□□ -0.46
KARS-204ENST00000564578 INHBAP08476 426 aa12.16□□□□□ -0.46
KARS-204ENST00000564578 SLC2A4P14672 509 aa12.16□□□□□ -0.46
KARS-204ENST00000564578 ZNF37AP17032 561 aaPredicted RBP12.16□□□□□ -0.46
KARS-204ENST00000564578 ATP5DP30049 168 aa12.16□□□□□ -0.46
KARS-204ENST00000564578 GMPRP36959 345 aa12.16□□□□□ -0.46
KARS-204ENST00000564578 MSH2P43246 934 aa12.16□□□□□ -0.46
KARS-204ENST00000564578 RPIAP49247 311 aa12.16□□□□□ -0.46
KARS-204ENST00000564578 ACADVLP49748 655 aa12.16□□□□□ -0.46
KARS-204ENST00000564578 ILF2Q12905 390 aaKnown RBP12.16□□□□□ -0.46
KARS-204ENST00000564578 ABRQ12979 859 aa12.16□□□□□ -0.46
KARS-204ENST00000564578 USP10Q14694 798 aaKnown RBP12.16□□□□□ -0.46
KARS-204ENST00000564578 NR1D2Q14995 579 aa12.16□□□□□ -0.46
KARS-204ENST00000564578 TMED2Q15363 201 aa12.16□□□□□ -0.46
KARS-204ENST00000564578 BEND6Q5SZJ8 279 aaPredicted RBP12.16□□□□□ -0.46
KARS-204ENST00000564578 UGT3A1Q6NUS8 523 aa12.16□□□□□ -0.46
KARS-204ENST00000564578 CMC1Q7Z7K0 106 aa12.16□□□□□ -0.46
KARS-204ENST00000564578 SLC9B2Q86UD5 537 aa12.16□□□□□ -0.46
KARS-204ENST00000564578 ZNF761Q86XN6 746 aaPredicted RBP12.16□□□□□ -0.46
KARS-204ENST00000564578 RASGRP3Q8IV61 690 aa12.16□□□□□ -0.46
KARS-204ENST00000564578 ANKRD49Q8WVL7 239 aa12.16□□□□□ -0.46
KARS-204ENST00000564578 NRTNQ99748 197 aa12.16□□□□□ -0.46
KARS-204ENST00000564578 POT1Q9NUX5 634 aa12.16□□□□□ -0.46
KARS-204ENST00000564578 TSR3Q9UJK0 312 aaKnown RBP12.16□□□□□ -0.46
KARS-204ENST00000564578 WDFY3Q8IZQ1 3526 aa12.16□□□□□ -0.46
KARS-204ENST00000564578 IFRD1O00458 451 aaPredicted RBP12.15□□□□□ -0.46
KARS-204ENST00000564578 PHGDHO43175 533 aaKnown RBP12.15□□□□□ -0.46
KARS-204ENST00000564578 TPBGLP0DKB5 382 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 CBSLP0DN79 551 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 CEACAM1P13688 526 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 CBSP35520 551 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 DAB2P98082 770 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 PDAP1Q13442 181 aaKnown RBP12.15□□□□□ -0.46
KARS-204ENST00000564578 GPR18Q14330 331 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 TTLL9Q3SXZ7 439 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 MAP9Q49MG5 647 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 PIWIL4Q7Z3Z4 852 aaKnown RBP12.15□□□□□ -0.46
KARS-204ENST00000564578 OR5AR1Q8NGP9 310 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 HNRNPLLQ8WVV9 542 aaKnown RBP12.15□□□□□ -0.46
KARS-204ENST00000564578 CXorf40BQ96DE9 158 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 POPDC3Q9HBV1 291 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 EURLQ9NYK6 297 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 CTNNAL1Q9UBT7 734 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 ASF1AQ9Y294 204 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 UNC13CQ8NB66 2214 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 SPAARA0A1B0GVQ0 90 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 DCDC2BA2VCK2 349 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 B4GAT1O43505 415 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 TCEA3O75764 348 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 VIPP01282 170 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 SLC35E2BP0CK96 405 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 ENO3P13929 434 aaPredicted RBP12.15□□□□□ -0.46
KARS-204ENST00000564578 PNLIPP16233 465 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 STMN1P16949 149 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 RAB10P61026 200 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 NEK10Q6ZWH5 1172 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 EFL1Q7Z2Z2 1120 aaKnown RBP12.15□□□□□ -0.46
KARS-204ENST00000564578 SLCO6A1Q86UG4 719 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 IQCKQ8N0W5 287 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 OR6C4Q8NGE1 309 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 OR5K2Q8NHB8 316 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 CFAP61Q8NHU2 1237 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 IFI44Q8TCB0 444 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 ASB11Q8WXH4 323 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 DLG3Q92796 817 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 CCDC74AQ96AQ1 378 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 PDLIM5Q96HC4 596 aaKnown RBP12.15□□□□□ -0.46
KARS-204ENST00000564578 UBXN10Q96LJ8 280 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 RTKNQ9BST9 563 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 SLC32A1Q9H598 525 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 KIR3DX1Q9H7L2 352 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 GPAMQ9HCL2 828 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 SLC24A2Q9UI40 661 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 IKZF3Q9UKT9 509 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 IKBKGQ9Y6K9 419 aa12.15□□□□□ -0.46
KARS-204ENST00000564578 KRT87PA6NCN2 255 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms