RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 EFNA1P20827 205 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 GATA2P23769 480 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 PON1P27169 355 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 MAGEA11P43364 429 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 PRAMEP78395 509 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 DLG2Q15700 870 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 MMS22LQ6ZRQ5 1243 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 SH2D6Q7Z4S9 175 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 PIGZQ86VD9 579 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 TICAM1Q8IUC6 712 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 SMC5Q8IY18 1101 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 TEX11Q8IYF3 940 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 SUSD6Q92537 303 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 ZNF300Q96RE9 604 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 SRSF8Q9BRL6 282 aaKnown RBP2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 SLC7A10Q9NS82 523 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 TAS2R14Q9NYV8 317 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 ORC3Q9UBD5 711 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 FBXL17Q9UF56 701 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 LRWD1Q9UFC0 647 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 MYO1GB0I1T2 1018 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 B4E171 279 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 KHDRBS3O75525 346 aaKnown RBP2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 RSL1D1O76021 490 aaKnown RBP2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 CLDN1O95832 211 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 GPIP06744 558 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 LAMP2P13473 410 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 PRLRP16471 622 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 CA4P22748 312 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 KRTAP5-9P26371 169 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 TSPAN7P41732 249 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 SLC8A3P57103 927 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 B3GALT5-AS1P59052 145 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 DMPKQ09013 629 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 SGSM1Q2NKQ1 1148 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 TCTEX1D4Q5JR98 221 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 GRTP1Q5TC63 336 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 SNX30Q5VWJ9 437 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 TMEM154Q6P9G4 183 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 TRIM65Q6PJ69 517 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 LINGO4Q6UY18 593 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 IKBIPQ70UQ0 350 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 RAB42Q8N4Z0 105 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 DCLK2Q8N568 766 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 WDTC1Q8N5D0 677 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 AMER3Q8N944 861 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 UCMAQ8WVF2 138 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 ERLEC1Q96DZ1 483 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 MTERF3Q96E29 417 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 PSMD1Q99460 953 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 C1QTNF1Q9BXJ1 281 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 CLEC7AQ9BXN2 247 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 ITPAQ9BY32 194 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 VN1R1Q9GZP7 353 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 RHCGQ9UBD6 479 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 AMACRQ9UHK6 382 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 OSGIN1Q9UJX0 560 aa2.84□□□□□ -1.95
HMGB1P33-201ENST00000563485 A0A1W2PN81 502 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 PRKRAO75569 313 aaKnown RBP2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 RB1P06400 928 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 CLTBP09497 229 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 ACADSP16219 412 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 AZU1P20160 251 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 CHMP24386 653 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 SHC1P29353 583 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 CHRNA7P36544 502 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 CDH8P55286 799 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 CX3CL1P78423 397 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 PRKCZQ05513 592 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 GRAPQ13588 217 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 KRT32Q14532 448 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 MELKQ14680 651 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 TAF13Q15543 124 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 UGP2Q16851 508 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 FAM98BQ52LJ0 330 aaKnown RBP2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 BSPRYQ5W0U4 402 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 CHST9Q7L1S5 443 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 FAM114A1Q8IWE2 563 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 MAPKAPK5-AS1Q8N8E1 139 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 RNF128Q8TEB7 428 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 ZFAND2BQ8WV99 257 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 DYRK2Q92630 601 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 C16orf70Q9BSU1 422 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 ARRDC1-AS1Q9H2J1 176 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 CCDC177Q9NQR7 707 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 SDR39U1Q9NRG7 319 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 AASSQ9UDR5 926 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 ZHX2Q9Y6X8 837 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 RUSC2Q8N2Y8 1516 aa2.83□□□□□ -1.96
HMGB1P33-201ENST00000563485 MSGN1A6NI15 193 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 KLF11O14901 512 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 CD4P01730 458 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 TRIM49P0CI25 452 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 TRIM49CP0CI26 452 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 ARL3P36405 182 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 MPP1Q00013 466 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 DRP2Q13474 957 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms