RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 CD160O95971 181 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 HNRNPCP07910 306 aaKnown RBP eCLIP12.84□□□□□ -0.35
USB1-207ENST00000563149 IMPDH2P12268 514 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 TCF3P15923 654 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 ATF6P18850 670 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 CORO1AP31146 461 aaKnown RBP12.84□□□□□ -0.35
USB1-207ENST00000563149 NRIP1P48552 1158 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 PIK3CGP48736 1102 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 TUFMP49411 452 aaKnown RBP12.84□□□□□ -0.35
USB1-207ENST00000563149 HNRNPFP52597 415 aaKnown RBP12.84□□□□□ -0.35
USB1-207ENST00000563149 TPD52P55327 224 aaPredicted RBP12.84□□□□□ -0.35
USB1-207ENST00000563149 RPL38P63173 70 aaKnown RBP12.84□□□□□ -0.35
USB1-207ENST00000563149 PLA2G4EQ3MJ16 856 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 ZC3H12BQ5HYM0 836 aaKnown RBP12.84□□□□□ -0.35
USB1-207ENST00000563149 ADGRF1Q5T601 910 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 GTF2IRD2BQ6EKJ0 949 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 RSPO2Q6UXX9 243 aaPredicted RBP12.84□□□□□ -0.35
USB1-207ENST00000563149 R3HCC1LQ7Z5L2 792 aaKnown RBP12.84□□□□□ -0.35
USB1-207ENST00000563149 GPR149Q86SP6 731 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 GTF2IRD2Q86UP8 949 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 MICU2Q8IYU8 434 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 SPARTQ8N0X7 666 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 EID3Q8N140 333 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 OR10A6Q8NH74 314 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 FAM162AQ96A26 154 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 BCL7BQ9BQE9 202 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 SLC29A3Q9BZD2 475 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 CLMPQ9H6B4 373 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 ACTR8Q9H981 624 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 MARCH5Q9NX47 278 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 OPTCQ9UBM4 332 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 LHX3Q9UBR4 397 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 PDE10AQ9Y233 779 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 K7EPI3 171 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 ULK1O75385 1050 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 STC2O76061 302 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 GJB5O95377 273 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 PGRP06401 933 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 PCNAP12004 261 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 RYKP34925 604 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 HSPA7P48741 367 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 CDKL4Q5MAI5 379 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 CXorf57Q6NSI4 855 aaKnown RBP12.84□□□□□ -0.35
USB1-207ENST00000563149 DUS1LQ6P1R4 473 aaKnown RBP12.84□□□□□ -0.35
USB1-207ENST00000563149 LINC00299Q6ZSB3 139 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 FAM43BQ6ZT52 329 aaPredicted RBP12.84□□□□□ -0.35
USB1-207ENST00000563149 CHST15Q7LFX5 561 aaPredicted RBP12.84□□□□□ -0.35
USB1-207ENST00000563149 SNX20Q7Z614 316 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 SERPINA9Q86WD7 417 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 HIPK1Q86Z02 1210 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 PLPP6Q8IY26 295 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 CHDHQ8NE62 594 aaPredicted RBP12.84□□□□□ -0.35
USB1-207ENST00000563149 FBXO30Q8TB52 745 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 TANKQ92844 425 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 TBC1D20Q96BZ9 403 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 MBOAT4Q96T53 435 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 TMEM175Q9BSA9 504 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 CIPCQ9C0C6 399 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 LHPPQ9H008 270 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 ADNPQ9H2P0 1102 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 LATS2Q9NRM7 1088 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 DCAF13Q9NV06 445 aaKnown RBP12.84□□□□□ -0.35
USB1-207ENST00000563149 GABRQQ9UN88 632 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 NAALAD2Q9Y3Q0 740 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 PCDHGA8Q9Y5G5 932 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 SNX5Q9Y5X3 404 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 TRBV5-3A0A0A0MS03 114 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 TRBV5-4A0A0C4DH59 114 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 ZNF840PA6NDX5 716 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 SOBPA7XYQ1 873 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 SLC16A6O15403 523 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 MAGEB3O15480 346 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 COCHO43405 550 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 RECQL5O94762 991 aaPredicted RBP12.83□□□□□ -0.36
USB1-207ENST00000563149 LATS1O95835 1130 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 KLKB1P03952 638 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 CCDC159P0C7I6 412 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 ITIH1P19827 911 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 CD247P20963 164 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 UGT1A1P22309 533 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 UGT1A4P22310 534 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 UGT1A3P35503 534 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 UGT1A5P35504 534 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 RAD23AP54725 363 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 AP1S1P61966 158 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 BNIP3Q12983 259 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 CRHR2Q13324 411 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 MBTPS1Q14703 1052 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 IMPG1Q17R60 797 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 C18orf21Q32NC0 220 aaPredicted RBP12.83□□□□□ -0.36
USB1-207ENST00000563149 FAM174BQ3ZCQ3 159 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 LRIF1Q5T3J3 769 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 ARMC12Q5T9G4 340 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 ENPP6Q6UWR7 440 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 CALHM3Q86XJ0 350 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 ZCCHC7Q8N3Z6 543 aaKnown RBP12.83□□□□□ -0.36
USB1-207ENST00000563149 LIX1Q8N485 282 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 USP7Q93009 1102 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 ZNF566Q969W8 418 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 B3GALT6Q96L58 329 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms