RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 INPP5JQ15735 1006 aaPredicted RBP12.61□□□□□ -0.39
SF3B3-202ENST00000562722 KYNUQ16719 465 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 PRR30Q53SZ7 412 aaPredicted RBP12.61□□□□□ -0.39
SF3B3-202ENST00000562722 PAPD7Q5XG87 772 aaKnown RBP12.61□□□□□ -0.39
SF3B3-202ENST00000562722 JMJD6Q6NYC1 403 aaPredicted RBP12.61□□□□□ -0.39
SF3B3-202ENST00000562722 BBS12Q6ZW61 710 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 RAB43Q86YS6 212 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 CDKL3Q8IVW4 592 aaPredicted RBP12.61□□□□□ -0.39
SF3B3-202ENST00000562722 NXPE1Q8N323 547 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 FDCSPQ8NFU4 85 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 OR13C4Q8NGS5 318 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 ADAMTS17Q8TE56 1095 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 SSC4DQ8WTU2 575 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 HEXDCQ8WVB3 486 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 LRRC45Q96CN5 670 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 HGH1Q9BTY7 390 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 NUDT9Q9BW91 350 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 SLC29A3Q9BZD2 475 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 COG4Q9H9E3 785 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 VPS37BQ9H9H4 285 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 SYTL2Q9HCH5 934 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 MLXIPLQ9NP71 852 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 CASS4Q9NQ75 786 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 PCMTD2Q9NV79 361 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 GPR83Q9NYM4 423 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 PADI2Q9Y2J8 665 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 PCDHGB7Q9Y5F8 929 aa12.61□□□□□ -0.39
SF3B3-202ENST00000562722 TNRC6AQ8NDV7 1962 aaKnown RBP12.61□□□□□ -0.39
SF3B3-202ENST00000562722 A1L4Q6 167 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 C2orf74A8MZ97 194 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 AKR1B15C9JRZ8 316 aaPredicted RBP12.6□□□□□ -0.39
SF3B3-202ENST00000562722 E7EQ34 232 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 BTN3A3O00478 584 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 KCNN4O15554 427 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 SGTAO43765 313 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 SEMA7AO75326 666 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 ATP1B2P14415 290 aaPredicted RBP12.6□□□□□ -0.39
SF3B3-202ENST00000562722 PVRP15151 417 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 AGXTP21549 392 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 OTX2P32243 289 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 HADHAP40939 763 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 XIAPP98170 497 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 PRKG2Q13237 762 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 ATP1A4Q13733 1029 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 NCF4Q15080 339 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 ZRANB3Q5FWF4 1079 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 DARS2Q6PI48 645 aaKnown RBP12.6□□□□□ -0.39
SF3B3-202ENST00000562722 FAM198BQ6UWH4 519 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 MED25Q71SY5 747 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 SNX20Q7Z614 316 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 AMIGO1Q86WK6 493 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 GPR135Q8IZ08 494 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 TMEM102Q8N9M5 508 aaPredicted RBP12.6□□□□□ -0.39
SF3B3-202ENST00000562722 PHC3Q8NDX5 983 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 KRT35Q92764 455 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 SGSM3Q96HU1 749 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 GORASP1Q9BQQ3 440 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 XKR8Q9H6D3 395 aa12.6□□□□□ -0.39
SF3B3-202ENST00000562722 C17orf113A0A1B0GUU1 675 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 ZNF749O43361 778 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 CEACAM4O75871 244 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 HBQ1P09105 142 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 MC4RP32245 332 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 ADRA1AP35348 466 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 ZNF140P52738 457 aaPredicted RBP12.59□□□□□ -0.39
SF3B3-202ENST00000562722 EIF3EP60228 445 aaKnown RBP12.59□□□□□ -0.39
SF3B3-202ENST00000562722 OTUD4Q01804 1114 aaKnown RBP12.59□□□□□ -0.39
SF3B3-202ENST00000562722 MRPL49Q13405 166 aaKnown RBP12.59□□□□□ -0.39
SF3B3-202ENST00000562722 SPARCL1Q14515 664 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 EIF2S3LQ2VIR3 472 aaKnown RBP12.59□□□□□ -0.39
SF3B3-202ENST00000562722 ANKRD20A2Q5SQ80 823 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 ANKRD20A1Q5TYW2 823 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 ANKRD20A3Q5VUR7 823 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 SLC6A19Q695T7 634 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 C11orf63Q6NUN7 778 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 SARM1Q6SZW1 724 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 RANBP10Q6VN20 620 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 TAS2R42Q7RTR8 314 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 HPS6Q86YV9 775 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 ZBTB2Q8N680 514 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 OR52E1Q8NGJ3 308 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 PRR7Q8TB68 274 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 ACTL9Q8TC94 416 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 TRAPPC9Q96Q05 1148 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 NRTNQ99748 197 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 FAM118BQ9BPY3 351 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 TBL1YQ9BQ87 522 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 PITPNM3Q9BZ71 974 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 MVB12BQ9H7P6 319 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 IRAK4Q9NWZ3 460 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 ZDHHC3Q9NYG2 299 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 ACTR10Q9NZ32 417 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 GPN3Q9UHW5 284 aaPredicted RBP12.59□□□□□ -0.39
SF3B3-202ENST00000562722 TFR2Q9UP52 801 aa12.59□□□□□ -0.39
SF3B3-202ENST00000562722 USP9YO00507 2555 aaPredicted RBP12.59□□□□□ -0.39
SF3B3-202ENST00000562722 TCP11X1B4DZS4 312 aa12.58□□□□□ -0.4
SF3B3-202ENST00000562722 LDB2O43679 373 aa12.58□□□□□ -0.4
SF3B3-202ENST00000562722 PTMAP06454 111 aaKnown RBP12.58□□□□□ -0.4
SF3B3-202ENST00000562722 RBP3P10745 1247 aa12.58□□□□□ -0.4
SF3B3-202ENST00000562722 VARSP26640 1264 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms